genbio-ai / ModelGeneratorLinks
AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt pretrained models and generate finetuned models for downstream tasks.
☆88Updated last week
Alternatives and similar repositories for ModelGenerator
Users that are interested in ModelGenerator are comparing it to the libraries listed below
Sorting:
- RiboNucleic Acid (RNA) Language Model☆117Updated 2 months ago
- ☆90Updated 10 months ago
- Repository for mRNA Paper and CodonBERT publication.☆133Updated last year
- Protein language model trained on coding DNA☆47Updated 9 months ago
- ☆105Updated 3 weeks ago
- Code repository of "Deep generative design of RNA family sequences"☆35Updated last year
- ☆68Updated 10 months ago
- Efficient implementatin of ESM family.☆59Updated 6 months ago
- ☆35Updated last year
- open source code for Tencent tFold☆106Updated 4 months ago
- Geometric deep learning of protein–DNA binding specificity☆76Updated 4 months ago
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆115Updated last month
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆100Updated 2 weeks ago
- ☆44Updated 11 months ago
- ☆36Updated 6 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆78Updated last year
- Public repository describing training and testing of AntiBERTa.☆60Updated 2 years ago
- ☆49Updated last year
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆30Updated last month
- RNA Multiple Sequence Alignment☆43Updated 2 years ago
- Primary RNA sequence model☆38Updated last year
- ☆112Updated last year
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆48Updated 10 months ago
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆65Updated last year
- ☆18Updated 9 months ago
- python tools for TCR:peptide-MHC modeling and analysis☆80Updated last year
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆68Updated 6 months ago
- ☆55Updated last year
- ☆107Updated last year
- CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 speci…☆168Updated 2 weeks ago