genbio-ai / ModelGenerator
AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt pretrained models and generate finetuned models for downstream tasks.
☆56Updated this week
Alternatives and similar repositories for ModelGenerator
Users that are interested in ModelGenerator are comparing it to the libraries listed below
Sorting:
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆87Updated this week
- Protein language model trained on coding DNA☆47Updated 6 months ago
- RiboNucleic Acid (RNA) Language Model☆100Updated last month
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆58Updated 3 months ago
- Efficient implementatin of ESM family.☆55Updated 3 months ago
- ☆84Updated 7 months ago
- Repository for mRNA Paper and CodonBERT publication.☆128Updated 11 months ago
- ☆36Updated 4 months ago
- Primary RNA sequence model☆38Updated 11 months ago
- ☆68Updated 7 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆60Updated 9 months ago
- Large language modeling applied to T-cell receptor (TCR) sequences.☆53Updated 3 years ago
- Code repository of "Deep generative design of RNA family sequences"☆33Updated 10 months ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- ☆35Updated last year
- ☆40Updated last month
- Contrastive learning harmonizing protein language models and natural language models☆32Updated 11 months ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆35Updated 4 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆71Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆113Updated 2 months ago
- open source code for Tencent tFold☆99Updated 2 months ago
- ☆21Updated 3 months ago
- Learning the language of protein-protein interactions☆73Updated 3 weeks ago
- Geometric deep learning of protein–DNA binding specificity☆69Updated last month
- Aligning protein generative models with experimental fitness☆94Updated 6 months ago
- Official implement of paper "Multi-purpose RNA Language Modeling with Motif-aware Pre-training and Type-guided Fine-tuning"☆44Updated 7 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆75Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 9 months ago
- ☆53Updated last year