genbio-ai / ModelGenerator
AIDO.ModelGenerator is a software stack powering the development of an AI-driven Digital Organism (AIDO) by enabling researchers to adapt pretrained models and generate finetuned models for downstream tasks.
☆39Updated 3 months ago
Alternatives and similar repositories for ModelGenerator:
Users that are interested in ModelGenerator are comparing it to the libraries listed below
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆69Updated 2 months ago
- Efficient implementatin of ESM family.☆54Updated 2 months ago
- Protein language model trained on coding DNA☆46Updated 5 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆70Updated 11 months ago
- Aligning protein generative models with experimental fitness☆88Updated 5 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆53Updated last month
- ☆93Updated 4 months ago
- RiboNucleic Acid (RNA) Language Model☆92Updated this week
- ☆36Updated 2 months ago
- ☆66Updated 6 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆28Updated 7 months ago
- Public repository describing training and testing of AntiBERTa.☆58Updated last year
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆107Updated last week
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆56Updated 8 months ago
- ☆31Updated last year
- ☆98Updated 8 months ago
- Learning the language of protein-protein interactions☆56Updated last week
- Inference code for Bio-Inspired Antibody Language Model☆24Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 2 months ago
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆59Updated last month
- ☆78Updated 5 months ago
- Code repository of "Deep generative design of RNA family sequences"☆32Updated 8 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆28Updated 3 months ago
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆30Updated 3 months ago
- RNA Multiple Sequence Alignment☆35Updated last year
- [NeurIPS 2024] MSA generative pretraining for advancing protein structure prediction☆30Updated last week
- Fast deep learning methods for large-scale protein-protein interaction screening☆35Updated 5 months ago
- ☆61Updated 5 months ago
- The first large protein language model trained follows structure instructions.☆76Updated 9 months ago