Primer3Plus is an advanced web interface for primer3.
☆44Apr 26, 2025Updated 10 months ago
Alternatives and similar repositories for primer3plus
Users that are interested in primer3plus are comparing it to the libraries listed below
Sorting:
- Primer3Web is a simple web interface to primer3.☆17Aug 18, 2021Updated 4 years ago
- Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).☆275May 14, 2025Updated 9 months ago
- Removing PCR duplicates for sequencing reads.☆14Sep 8, 2020Updated 5 years ago
- PrimerServer2: a high-throughput primer design and specificity-checking platform☆81Dec 5, 2022Updated 3 years ago
- Code for design of diagnostic PCR primers, and metabarcoding markers.☆63Nov 7, 2023Updated 2 years ago
- ☆19Dec 4, 2025Updated 3 months ago
- The Zika bioinformatics pipeline☆37Mar 29, 2020Updated 5 years ago
- A powerful Perl module for simulating the genome digestions by restriction enzymes☆14Sep 10, 2024Updated last year
- ☆21Sep 22, 2022Updated 3 years ago
- Retrieve sequences flanked by an arbitrary number of primers from a nucleotide collection.☆11Jun 11, 2021Updated 4 years ago
- Draw genetic map (linkage map) in R☆13Nov 12, 2017Updated 8 years ago
- A Full Featured Multiple Sequence Alignment Editor.☆26May 21, 2018Updated 7 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆37May 21, 2024Updated last year
- SARS-CoV-2: detecting recombinations in viruses using large data sets with high sequence similarity☆13Aug 14, 2023Updated 2 years ago
- ViroBLAST standalone package☆16Apr 4, 2024Updated last year
- GenomeThreader gene prediction software.☆14Nov 10, 2025Updated 3 months ago
- This python script can be used to detect Whole-genome duplication (WGD) with the dS based method.☆25Feb 22, 2019Updated 7 years ago
- ☆16Aug 17, 2023Updated 2 years ago
- Design gene specific KASP and CAPS/dCAPS primers for any species☆18Sep 19, 2022Updated 3 years ago
- Phylogeny Enhanded Prediction of PAN-genome☆43Jul 17, 2020Updated 5 years ago
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆26Nov 14, 2025Updated 3 months ago
- Scalable high-throughput short-read open reading frame prediction☆12Jan 13, 2017Updated 9 years ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆18Sep 1, 2023Updated 2 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆31May 23, 2024Updated last year
- A list of cool software for genetic analysis and the like☆12Sep 21, 2018Updated 7 years ago
- Metagenome analysis using the Kraken software suite☆36Sep 29, 2022Updated 3 years ago
- Spaghetti: in situ analysis of 16S rRNA amplicons obtained by nanopore sequencing☆19Jul 26, 2024Updated last year
- A tool to design highly specific PCR primers for the validation of genomic alterations including structural variants☆47May 21, 2017Updated 8 years ago
- Clin-mNGS: Automated pipeline for pathogen detection from clinical metagenomic data☆18Jun 29, 2021Updated 4 years ago
- Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format☆21Oct 15, 2010Updated 15 years ago
- Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens☆37Jan 22, 2026Updated last month
- In-silico PCR, primer design and padlock design for in-situ sequencing☆53Updated this week
- ☆14Mar 22, 2018Updated 7 years ago
- annotation pipeline for microbial genomes and metagenomes☆18Feb 23, 2018Updated 8 years ago
- Distributed and cloud computing framework for vg☆23Updated this week
- ☆10Jan 20, 2022Updated 4 years ago
- Assembly by Reduced Complexity (ARC)☆42Mar 29, 2016Updated 9 years ago
- GrapeTree is a fully interactive, tree visualization program, which supports facile manipulations of both tree layout and metadata. Click…☆87Dec 15, 2024Updated last year
- Wrapper script to concatenate, align, and construct phylogenetic trees of BUSCOs☆20Sep 18, 2019Updated 6 years ago