TrinityCTAT / CTAT-VirusIntegrationFinderLinks
☆17Updated 4 months ago
Alternatives and similar repositories for CTAT-VirusIntegrationFinder
Users that are interested in CTAT-VirusIntegrationFinder are comparing it to the libraries listed below
Sorting:
- for visual evaluation of read support for structural variation☆55Updated last year
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated last year
- ☆38Updated 2 years ago
- ☆37Updated last year
- Long-read Isoform Quantification and Analysis☆38Updated 8 months ago
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆69Updated this week
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆64Updated last year
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆16Updated 3 years ago
- Long read to rMATS☆32Updated 2 years ago
- ☆15Updated 7 years ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- A python package and a set of shell commands to handle GTF files☆50Updated last year
- ☆34Updated 2 years ago
- Long-read splice alignment with high accuracy☆64Updated last year
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆25Updated 3 weeks ago
- ☆24Updated 11 months ago
- ☆51Updated 6 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated 3 months ago
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated last year
- ☆25Updated 7 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆34Updated 4 months ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆56Updated last week
- Version II of Mandalorion☆32Updated 6 years ago
- Evolutionary Transcriptomics with R☆49Updated 3 weeks ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆28Updated last year
- ☆33Updated 3 weeks ago
- SingleCell Nanopore sequencing data analysis☆62Updated 6 months ago