rpetit3 / vcf-annotatorLinks
Add biological annotations to variants in a given VCF file.
☆32Updated 3 years ago
Alternatives and similar repositories for vcf-annotator
Users that are interested in vcf-annotator are comparing it to the libraries listed below
Sorting:
- Influenza genome analysis Nextflow workflow☆26Updated 2 months ago
- SHOOT.bio - the phylogenetic search engine☆25Updated 2 years ago
- Bacterial GWAS analysis☆40Updated last month
- Phylogenetic maximum representation sampling: choosing most representative strains or taxa☆38Updated 2 months ago
- A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.☆25Updated 2 months ago
- A toolkit for prokaryotic comparative genomics☆49Updated 5 months ago
- 🍊 💫 Trim, circularise and orient long read bacterial genome assemblies☆26Updated 5 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆23Updated last week
- Fast k-mer based tool for multi locus sequence typing (MLST)☆44Updated 4 years ago
- A pipeline for high-quality bacterial genome construction using ONT sequencing☆39Updated 2 years ago
- Repository for scripts and resources used for metagenomics with Nanopore, PacBio and Illumina sequencing☆21Updated 2 years ago
- A package to annotate protein sequences☆58Updated 4 months ago
- Eukaryotic genome annotation software.☆18Updated this week
- Evaluating Nanopore-based bacterial variant calling☆19Updated last month
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆28Updated 2 years ago
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆38Updated 3 weeks ago
- Intra-species bacterial contamination detection☆25Updated 4 months ago
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Updated 2 years ago
- tree visualization for tree + annotation data☆39Updated last week
- Python bindings for the TaxonKit library☆41Updated last month
- ☆28Updated 3 years ago
- Find Unique genomic Regions☆30Updated 2 months ago
- IslandPath standalone software☆32Updated last year
- Trimming tool for Oxford Nanopore sequence data☆21Updated 4 years ago
- Split Kmer Analysis☆65Updated 3 years ago
- Full-length de novo viral haplotype reconstruction from noisy long reads☆20Updated last year
- Gene-flank analysis tool☆27Updated 6 months ago
- MetaGeneMark-2: Improved Gene Prediction in Metagenomes☆21Updated last year
- A surveillance-oriented tool to strengthen the linkage between pathogen genetic clusters and epidemiological data☆37Updated 3 weeks ago