Edinburgh-Genome-Foundry / GeneblocksLinks
Find common blocks and differences between DNA sequences
☆42Updated 2 months ago
Alternatives and similar repositories for Geneblocks
Users that are interested in Geneblocks are comparing it to the libraries listed below
Sorting:
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 9 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- Python bindings for the TaxonKit library☆42Updated last week
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago
- 💫 Computer-aided DNA assembly validation and identification from restriction digests.☆15Updated 7 months ago
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Updated 2 years ago
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆63Updated 5 years ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆63Updated last year
- Taxon Information Query - fast, offline querying of NCBI Taxonomy and related data☆60Updated last year
- Nanopore Plasmid Sequencing☆34Updated 2 years ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- Read DNA sequences from colourful Microsoft Word documents☆34Updated 8 months ago
- Making bioinformatics fun again☆74Updated last month
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated 2 months ago
- Bacterial Annotation by Learned Representation of Genes☆58Updated 4 years ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- Database of virus RdRP barcode sequences☆16Updated last year
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 2 months ago
- Metagenomic search for novel CRISPR-transposons☆12Updated 4 years ago
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 3 years ago
- Multiple sequence alignment visualizer☆31Updated 2 years ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆46Updated 7 months ago
- Metagenome analysis using the Kraken software suite☆36Updated 3 years ago
- A genome browser in your Jupyter notebook☆31Updated 8 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated 2 months ago
- ☆31Updated 4 years ago
- A Rich renderable for viewing Multiple Sequence Alignments in the terminal.☆85Updated 3 years ago
- locally query the ncbi taxonomy☆39Updated 3 years ago
- Easily download genomes and build BLAST/Bowtie indexes in Python☆22Updated 3 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 2 months ago