jrjhealey / bioinfo-toolsLinks
Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
☆59Updated 4 years ago
Alternatives and similar repositories for bioinfo-tools
Users that are interested in bioinfo-tools are comparing it to the libraries listed below
Sorting:
- Python bindings for the TaxonKit library☆41Updated last month
- Parse GFF3 into Pandas dataframes☆27Updated last year
- Nanopore Plasmid Sequencing☆32Updated last year
- Fast and flexible ORF finder☆71Updated 3 years ago
- Tool package to perform in-silico CRISPR analysis and assessment☆28Updated last year
- A simple command-line tool to download data from Joint Genome Institute databases☆52Updated 2 years ago
- A Python module to analyze Sanger sequencing results.☆24Updated last year
- gatk4 RNA variant calling pipeline☆48Updated 3 weeks ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆25Updated 4 months ago
- Protein Alignment and Detection Interface☆61Updated last year
- Merging paired-end reads and removing adapters☆44Updated 3 months ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆58Updated last year
- ☆30Updated 5 months ago
- A list of awesome awesomeness related to bioinformatics and associated fields☆41Updated 3 months ago
- Error correction for Illumina RNA-seq reads☆67Updated last year
- A versatile toolkit for k-mers with taxonomic information☆78Updated 10 months ago
- Reference-guided multiple sequence alignment of viral genomes☆68Updated 2 weeks ago
- What should perfect bioinformatic tools be like?☆127Updated last month
- Bacterial Annotation by Learned Representation of Genes☆55Updated 4 years ago
- A collection of scripts to assist in the retrieval of data from the ENA Browser☆84Updated last year
- G4Hunter (2012_2015)- IECB - Bordeaux☆14Updated 5 years ago
- ☆35Updated last week
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆49Updated 9 months ago
- Tutorials on how to use the microGVL to do common bacterial bioinformatic tasks☆25Updated last year
- Detection of incorrectly labeled sequences across kingdoms☆86Updated 2 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 6 months ago
- Python library to visualize circular plasmid maps☆26Updated 3 years ago
- A genome browser in your Jupyter notebook☆31Updated last month
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆41Updated last year
- ☆26Updated 4 years ago