sanderlab / alignmentviewerLinks
Multiple sequence alignment visualizer
☆31Updated 2 years ago
Alternatives and similar repositories for alignmentviewer
Users that are interested in alignmentviewer are comparing it to the libraries listed below
Sorting:
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆63Updated 5 years ago
- Find common blocks and differences between DNA sequences☆42Updated 2 months ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆43Updated 3 weeks ago
- Nanopore Plasmid Sequencing☆34Updated 2 years ago
- Python bindings for the TaxonKit library☆41Updated last month
- The tRNA adaptation index☆19Updated 8 months ago
- Parse GFF3 into Pandas dataframes☆30Updated last year
- ☆24Updated last year
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 7 months ago
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated 2 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated last month
- EditR: an algorithm for simple and cost effective measurement of base editing by quantifying Sanger trace fluorescence☆33Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated 2 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆35Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- A simple command-line tool to download data from Joint Genome Institute databases☆51Updated 2 years ago
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆63Updated last year
- Deep learning embedding for nucleotide sequences☆19Updated 9 months ago
- A collection of Web Service Clients to consume EBI's Job Dispatcher tools via REST APIs☆54Updated last year
- ☆14Updated 7 years ago
- Python package to plot sequence logos☆29Updated 2 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆59Updated 10 months ago
- Desktop application for colouring/shading sequence alignments☆29Updated 2 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆42Updated this week
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆27Updated 2 years ago
- A console-based alignment viewer☆117Updated 6 months ago
- Detecting Sequence Signals in Targeting Peptides Using Deep Learning☆13Updated 6 years ago
- Associated code for EvoWeaver publication☆16Updated 7 months ago
- Sequence analysis library used by Eddy/Rivas lab code☆50Updated 4 months ago