Alternatives and similar repositories for rich-msa:

Users that are interested in rich-msa are comparing it to the libraries listed below

• soedinglab / plass
  sensitive and precise assembly of short sequencing reads
  ☆152Updated 3 months ago
• Russel88 / CRISPRCasTyper
  CCTyper: Automatic detection and subtyping of CRISPR-Cas operons
  ☆97Updated 11 months ago
• steineggerlab / Metabuli
  Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.
  ☆126Updated this week
• KatyBrown / CIAlign
  ☆120Updated 4 months ago
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆64Updated 3 years ago
• IndexThePlanet / Logan
  Logan Unitigs and Contigs
  ☆111Updated 2 months ago
• guyleonard / get_jgi_genomes
  A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.
  ☆32Updated 4 months ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆68Updated this week
• DessimozLab / fold_tree
  snakemake pipeline for creating trees from sequence sets
  ☆70Updated last week
• medema-group / bigslice
  A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data
  ☆77Updated last month
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆36Updated last week
• EddyRivasLab / infernal
  RNA secondary structure/sequence profiles for homology search and alignment
  ☆102Updated 2 months ago
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆106Updated 9 months ago
• jbloomlab / dms_tools2
  software for the analysis and visualization of deep mutational scanning data
  ☆33Updated 2 years ago
• soedinglab / spacedust
  Discovery of conserved gene clusters in multiple genomes
  ☆57Updated this week
• Arcadia-Science / ProteinCartography
  a pipeline to build similarity maps of protein space
  ☆30Updated last month
• ialbert / bio
  Making bioinformatics fun again
  ☆63Updated 7 months ago
• medema-group / BiG-SCAPE
  Similarity networks of biosynthetic gene clusters
  ☆91Updated this week
• arvestad / alv
  A console-based alignment viewer
  ☆107Updated 10 months ago
• gbouras13 / phold
  Phage Annotation using Protein Structures
  ☆92Updated this week
• glarue / jgi-query
  A simple command-line tool to download data from Joint Genome Institute databases
  ☆50Updated last year
• jrjhealey / bioinfo-tools
  Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.
  ☆56Updated 4 years ago
• moshi4 / pyMSAviz
  MSA(Multiple Sequence Alignment) visualization python package for sequence analysis
  ☆108Updated last month
• EnzoAndree / HmmPy
  A Pure-Python parser of HMMER3 output
  ☆18Updated 3 months ago
• EBI-Metagenomics / genomes-catalogue-pipeline
  MGnify genome analysis pipeline
  ☆104Updated this week
• art-egorov / lovis4u
  Bioinformatics tool for Locus Visualisation
  ☆83Updated this week
• AnimaTardeb / G4Hunter
  G4Hunter (2012_2015)- IECB - Bordeaux
  ☆13Updated 4 years ago
• steineggerlab / unicore
  Universal and efficient core gene phylogeny with Foldseek and ProstT5
  ☆45Updated this week
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆35Updated last year
• salzberg-lab / Balrog
  Bacterial Annotation by Learned Representation of Genes
  ☆54Updated 3 years ago