Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.
☆26Feb 13, 2025Updated last year
Alternatives and similar repositories for ASAP
Users that are interested in ASAP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- User-friendly software for viewing and processing Sanger DNA sequencing trace files.☆34Mar 27, 2018Updated 8 years ago
- functions to analyse sanger sequencing reads in R☆108May 6, 2026Updated 5 months ago
- Sanger sequencing toolkit: chromatogram visualization, mutation calling, QC, base-calling, trimming, assembly and export (CLI + Python + …☆26Oct 1, 2026Updated last week
- Metagenomic search for novel CRISPR-transposons☆12Sep 30, 2021Updated 5 years ago
- ☆10Aug 29, 2012Updated 14 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files☆125Oct 2, 2026Updated last week
- Pipeline to automatically analyse SARS-CoV-2 Whole genome sequencing Illumina data obtained using EasySeq SARS-CoV-2/COVID-19 Whole Geno…☆15Jul 26, 2022Updated 4 years ago
- CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.☆48May 5, 2026Updated 5 months ago
- Mycobacterium tuberculosis genomic analysis from Nanopore sequencing data☆15Jun 5, 2026Updated 4 months ago
- Finding prophage regions in bacterial genomes using brute force☆22Jan 20, 2023Updated 3 years ago
- ☆23Sep 28, 2026Updated last week
- Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products☆37Sep 3, 2026Updated last month
- A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research☆20Aug 10, 2026Updated 2 months ago
- Ultrafast sequence typing and gene detection from NGS raw reads☆20Apr 15, 2021Updated 5 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Rails application for storing and parsing clinical exome VCF files. Gene annotations can be retrieved via Biomart integration from Ensemb…☆10May 7, 2017Updated 9 years ago
- A simple nextflow pipeline for running kraken2 and bracken in a docker container☆22Oct 8, 2025Updated last year
- gNOMO2 allows integrated multi-omics analyses of microbiomes☆15Aug 7, 2024Updated 2 years ago
- ☆11Aug 18, 2026Updated last month
- Documentation for analyzing SARS-Cov2 samples.☆12Jun 4, 2020Updated 6 years ago
- Bioinformatics pipeline for SARS-CoV-2 sequencing at CZ Biohub☆25Mar 26, 2022Updated 4 years ago
- Primer3Web is a simple web interface to primer3.☆17Aug 18, 2021Updated 5 years ago
- A pipeline for Bacterial Whole genome sequence data analysis☆15Jul 24, 2022Updated 4 years ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores …☆17Aug 9, 2018Updated 8 years ago
- ☆45Mar 13, 2026Updated 6 months ago
- Variant call verification☆19May 12, 2025Updated last year
- Sequencing analysis pipeline☆16Dec 12, 2025Updated 9 months ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆19Sep 1, 2023Updated 3 years ago
- Bioinformatics Pipeline and Visualization resources☆68Aug 30, 2024Updated 2 years ago
- This is a Genome Annotation Framework developed with the goal of annotating VCF files (Exomes or Genomes) from patients with Mendelian Di…☆23May 16, 2026Updated 4 months ago
- A simple django based inventory control system designed to meet government organizations needs.☆13Feb 16, 2011Updated 15 years ago
- A PCR primer tool for DNA assembly flows☆33Apr 24, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- BACTpipe: An assembly and annotation pipeline for bacterial genomics☆21Aug 13, 2026Updated last month
- A deliberately simple Django app for managing IT inventory☆13Jul 14, 2016Updated 10 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 4 years ago
- A Python module to analyze Sanger sequencing results.☆28Dec 6, 2023Updated 2 years ago
- Bacterial genomes finishing tool for structural insights on draft genomes☆23Sep 22, 2023Updated 3 years ago
- Computes a consensus sequence with wobbles, ambiguous bases, and in-frame insertions, from a NGS read alignment.☆18May 14, 2018Updated 8 years ago
- Multiplex PCR design, in silico☆25Mar 4, 2025Updated last year