HadrienG / tutorialsLinks
Various bioinformatics tutorials
☆62Updated 2 years ago
Alternatives and similar repositories for tutorials
Users that are interested in tutorials are comparing it to the libraries listed below
Sorting:
- Snakemake workflow for metagenomic classification with Kraken2☆66Updated 2 years ago
- A small-RNA sequencing analysis pipeline☆98Updated this week
- Accurate and rapid RiboRNA sequences Detector based on deep learning☆116Updated last month
- What should perfect bioinformatic tools be like?☆142Updated last month
- Bioinformatics Tools☆90Updated last month
- Fast and flexible ORF finder☆76Updated 3 years ago
- A simple RNA-Seq differential gene expression pipeline using Nextflow☆100Updated 4 months ago
- ☆75Updated 4 years ago
- A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA☆109Updated 4 months ago
- A collection of scripts to assist in the retrieval of data from the ENA Browser☆91Updated 4 months ago
- gutSMASH☆55Updated 2 months ago
- Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing☆122Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- Match up paired end fastq files quickly and efficiently.☆153Updated last year
- Course material for the metagenomics course☆47Updated 3 years ago
- This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.☆55Updated last week
- The Subread software package is a tool kit for processing next-gen sequencing data. It includes Subread aligner, Subjunc exon-exon juncti…☆52Updated 2 years ago
- Analysis of metagenomic shotgun sequences including assembly, speciation, ARG discovery and more☆36Updated 2 years ago
- ☆34Updated 5 years ago
- ShortStack: Comprehensive annotation and quantification of small RNA genes☆97Updated 2 months ago
- This repository hosts a large collection of Nextflow snippets☆56Updated 11 months ago
- Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.☆25Updated 10 months ago
- materials for the RNA-Seq workshop on Trinity and Tuxedo, covering de novo and genome-guided transcript assembly and downstream analysis.☆48Updated 9 years ago
- Issue tracker for the Biostar Handbook☆64Updated 3 years ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆86Updated 2 weeks ago
- FunGAP: fungal Genome Annotation Pipeline☆111Updated 6 months ago
- MGnify genome analysis pipeline☆109Updated this week
- course about NGS data processing: genomics and transcriptomics☆33Updated 4 years ago
- A catalogue of available long read sequencing data analysis tools☆83Updated 3 months ago
- Computational workflows for metagenomics tasks, by the Bhatt lab☆47Updated 2 years ago