Alternatives and similar repositories for tutorials

Users that are interested in tutorials are comparing it to the libraries listed below

• hoelzer-lab / rnaflow
  A simple RNA-Seq differential gene expression pipeline using Nextflow
  ☆102Updated last month
• shenwei356 / perfect-bioinformatic-tools
  What should perfect bioinformatic tools be like?
  ☆129Updated 3 months ago
• bhattlab / kraken2_classification
  Snakemake workflow for metagenomic classification with Kraken2
  ☆65Updated 2 years ago
• enasequence / enaBrowserTools
  A collection of scripts to assist in the retrieval of data from the ENA Browser
  ☆87Updated last week
• urmi-21 / orfipy
  Fast and flexible ORF finder
  ☆73Updated 3 years ago
• grimmlab / MicrobiomeBestPracticeReview
  Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing
  ☆120Updated last year
• nf-core / smrnaseq
  A small-RNA sequencing analysis pipeline
  ☆89Updated 2 months ago
• AstrobioMike / bit
  Bioinformatics Tools
  ☆89Updated last week
• hzi-bifo / RiboDetector
  Accurate and rapid RiboRNA sequences Detector based on deep learning
  ☆113Updated last year
• nf-core / differentialabundance
  Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
  ☆81Updated last week
• victoriapascal / gutsmash
  gutSMASH
  ☆55Updated 7 months ago
• vappiah / bacterial-genomics-tutorial
  ☆52Updated last year
• EBI-Metagenomics / genomes-catalogue-pipeline
  MGnify genome analysis pipeline
  ☆107Updated last week
• louiejtaylor / grabseqs
  A utility for easy downloading of reads from next-gen sequencing repositories like NCBI SRA
  ☆106Updated 5 years ago
• melbournebioinformatics / MelBioInf_docs
  Melbourne Bioinformatics documentation in markdown format
  ☆117Updated last month
• sanger-pathogens / pathogen-informatics-training
  ☆73Updated 4 years ago
• twbattaglia / MicrobeDS
  A repository for large-scale microbiome datasets, formatted for phyloseq
  ☆38Updated last year
• MikeAxtell / ShortStack
  ShortStack: Comprehensive annotation and quantification of small RNA genes
  ☆93Updated 2 months ago
• waldronlab / curatedMetagenomicDataAnalyses
  Analyses in R and Python Using curatedMetagenomicData
  ☆32Updated last week
• linsalrob / fastq-pair
  Match up paired end fastq files quickly and efficiently.
  ☆151Updated last year
• bpucker / teaching
  This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
  ☆52Updated last week
• nearinj / Comparison_of_DA_microbiome_methods
  ☆57Updated last year
• ohmeta / metapi
  A general metagenomics data mining system focus on robust microbiome research
  ☆58Updated 10 months ago
• biocorecrg / master_of_pores
  Nextflow pipeline for analysis of direct RNA Nanopore reads
  ☆106Updated last month
• giesselmann / nanopype
  Snakemake pipelines for nanopore sequencing data archiving and processing
  ☆91Updated 3 years ago
• Juke34 / awesome-awesomeness-bioinformatics
  A list of awesome awesomeness related to bioinformatics and associated fields
  ☆41Updated 4 months ago
• xia-lab / MicrobiomeAnalystR
  A companion R package for the MicrobiomeAnalyst web server
  ☆127Updated last month
• addityea / ASAP
  Automated Sanger Analysis Pipeline (ASAP): a tool for rapidly analyzing Sanger sequencing data with minimum user interference.
  ☆25Updated 5 months ago
• seqeralabs / nextflow-tutorial
  Nextflow training material for introductory tutorial
  ☆105Updated 3 years ago
• mribeirodantas / NextflowSnippets
  This repository hosts a large collection of Nextflow snippets
  ☆57Updated 6 months ago