clindet / anorLinks
anor: an annotation and visualization system based on R and Shiny framework
☆33Updated 5 years ago
Alternatives and similar repositories for anor
Users that are interested in anor are comparing it to the libraries listed below
Sorting:
- The official repository of the Bioconductor 2019 Conference Workshops☆25Updated 2 years ago
- Molecular Signatures Database (MSigDB) in a data frame☆16Updated 6 years ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆50Updated last month
- dplyr verbs for clusterProfiler outputs☆13Updated 5 years ago
- Analysis and Interpretation of Bulk RNA-Seq Data using Bioconductor☆23Updated last week
- An R for fast and flexible DNA methylation analysis☆33Updated last month
- R package for benchmarking single cell analysis methods☆32Updated last year
- R wrapper for utilizing the SigProfilerMatrixGenerator framework☆20Updated 2 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Gene-level general linear mixed model☆22Updated 7 months ago
- Toolbox package for organizing and working with TCGA data☆28Updated last month
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)☆29Updated 6 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆30Updated 3 months ago
- A toolkit developed by JhuangLab members to facilitate the analysis of next-generation sequencing (NGS) data.☆19Updated 6 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 9 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago
- R package of techniques for comparing clusterings of single-cell sequencing data☆39Updated last year
- HOT regions paper☆11Updated 6 years ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Identify and correct invalid gene symbols☆59Updated 9 months ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆17Updated 5 years ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- Multi-omic Integration and Analysis of cBioPortal and TCGA data with MultiAssayExperiment☆21Updated last month
- ☆28Updated last year
- TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020☆32Updated 3 years ago
- R package for plotting 3D graphical visualization of multi-omics data.☆22Updated 3 years ago