Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer
☆17Apr 16, 2020Updated 5 years ago
Alternatives and similar repositories for deep-stroma-histology
Users that are interested in deep-stroma-histology are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features☆17Jun 29, 2018Updated 7 years ago
- ☆11Jun 9, 2019Updated 6 years ago
- A pan-cancer platform for mutation prediction from routine histology☆69May 23, 2021Updated 4 years ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆102Jul 1, 2019Updated 6 years ago
- Source code of Statistical Computing 2 website☆12Feb 6, 2023Updated 3 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A MATLAB library providing bindings to the C library OpenSlide (https://github.com/openslide/openslide) used for reading whole-slide imag…☆19Jan 19, 2019Updated 7 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆67Oct 26, 2024Updated last year
- S5CL: Unifying Fully-Supervised, Self-Supervised, and Semi-Supervised Learning Through Hierarchical Contrastive Learning☆16Jan 29, 2023Updated 3 years ago
- Materials for GCB535 at Penn.☆20Apr 19, 2019Updated 6 years ago
- Similarity Network Fusion☆38Aug 12, 2015Updated 10 years ago
- Survival Convolutional Neural Networks☆67Apr 2, 2023Updated 2 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆89Mar 20, 2019Updated 7 years ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆14Jul 23, 2020Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis☆24Oct 31, 2017Updated 8 years ago
- Train a model to predict gene expression from histology slides.☆112Jul 6, 2022Updated 3 years ago
- PyTorch implementation of "Towards k-means-friendly spaces: Simultaneous deep learning and clustering," Bo Yang et al., 2017.☆17Jan 15, 2021Updated 5 years ago
- MineYourSymbiont : Targetted genome assembly for metagenomics pipeline.☆10Mar 3, 2023Updated 3 years ago
- ☆50May 9, 2022Updated 3 years ago
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆21Sep 30, 2018Updated 7 years ago
- Random forest with multivariate longitudinal predictors☆17Nov 19, 2025Updated 4 months ago
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆22Aug 17, 2020Updated 5 years ago
- Making survival analysis work in TensorFlow☆19Jun 4, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Code for "Disentangling images with Lie group transformations and sparse coding" (2023).☆13May 24, 2021Updated 4 years ago
- TCGA BLCA tmb prediction by Hongming Xu☆13Nov 1, 2020Updated 5 years ago
- PRObabilistic Simulations of ScRNA-seq Tree-like Topologies☆26Jan 10, 2024Updated 2 years ago
- Pattern of early human-to-human transmission of Wuhan 2019-nCoV☆31Feb 13, 2020Updated 6 years ago
- color/stain normalization on histological images using Reinhard, Macenko and Vahadane methods☆16Dec 14, 2021Updated 4 years ago
- Tensorflow Basic Sample Code☆19Nov 15, 2022Updated 3 years ago
- Simple library for preprocessing histopathological whole-slide images (WSI) into tiles (a.k.a. patches) towards deep learning☆57Sep 25, 2023Updated 2 years ago
- Bayesian Consensus Clustering, packaged up from code by Eric F. Lock☆19Jun 15, 2023Updated 2 years ago
- Exploratory data analysis for pooled CRISPR/Cas9 screens☆21Mar 6, 2017Updated 9 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Pan-cancer tils analysis study by Hongming Xu☆14Oct 29, 2020Updated 5 years ago
- Pipeline analysis for whole exome sequencing of pancreatic cancer PDX models☆23Oct 22, 2018Updated 7 years ago
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆23Apr 5, 2023Updated 2 years ago
- Detecting somatic mutations and predicting tumor-specific neo-antigens☆29Aug 10, 2021Updated 4 years ago
- ☆19Feb 20, 2018Updated 8 years ago
- IHC-image analysis workflow☆23May 29, 2018Updated 7 years ago
- Graph Neural Network model for survival analysis from multi-omics data☆14Mar 9, 2022Updated 4 years ago