PathologyDataScience / SCNN
Survival Convolutional Neural Networks
☆68Updated last year
Related projects ⓘ
Alternatives and complementary repositories for SCNN
- Data and code to accompany our Nature publication☆43Updated 2 years ago
- Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis☆74Updated 3 years ago
- A Python module that produces image patches and annotation masks from whole slide images for deep learning in digital pathology.☆79Updated 2 years ago
- Python scripts for automatic Whole-Slide Image preprocessing.☆35Updated 3 years ago
- Full package for applying deep learning to virtual slides.☆67Updated 6 years ago
- A biologically interpretable integrative deep learning model that integrates PAthological images and GEnomic data☆19Updated 4 years ago
- SALMON: Survival Analysis Learning with Multi-Omics Neural Networks☆69Updated 3 weeks ago
- predict microsatellite status from hematoxylin-eosin histology of gastrointestinal cancer☆100Updated 5 years ago
- This repository contains the implementation of TILAb-score as described in the original paper.☆17Updated 5 years ago
- A set of codes to classify H&E slides using deep learning☆28Updated 2 years ago
- Whole Slide Digital Pathology Image Tissue Localization☆44Updated last year
- Syntax - the arrangement of whole-slide-images and their image tiles to create well-formed computational pathology pipelines.☆55Updated last year
- A High-Throughput Workflow for Preprocessing, Deep Learning Analytics and Interpretation in Digital Pathology☆40Updated last year
- Corresponding code of 'Quiros A.C.+, Coudray N.+, Yeaton A., Yang X., Chiriboga L., Karimkhan A., Narula N., Pass H., Moreira A.L., Le Qu…☆49Updated last week
- Topological Feature Extraction on Whole Slide Images using Graph Neural Networks.☆24Updated 4 years ago
- CapSurv: Capsule Network for Survival Analysis With Whole Slide Pathological Images☆10Updated 5 years ago
- Re-stained whole slide image alignment☆31Updated last year
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆65Updated last year
- Unofficial implementation for ScanNet (a fast WSI prediction method) in PyTorch.☆22Updated last year
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆87Updated 4 years ago
- DLBCL-Morph dataset containing high resolution tissue microarray scans from 209 DLBCL cases, with geometric features computed using deep …☆36Updated 3 years ago
- Handling whole-slide images with region-level annotations.☆9Updated 5 years ago
- Code and GUI for Feature-driven Local Cell Graph (FLocK): New Computational Pathology based descriptors☆15Updated last year
- Code from Foersch et al. (Under Construction / Development)☆35Updated last year
- ☆23Updated 4 years ago
- Pathology image classifier architecture☆12Updated 4 years ago
- A tutorial demonstration of pathml on an example dataset for the manuscript "PathML: A unified framework for WSI analysis with deep learn…☆21Updated 2 years ago
- Deep Learning with Multimodal Representation for Pancancer Prognosis Prediction☆81Updated 5 years ago
- HCC_Deep_learning☆18Updated 4 years ago