Similarity Network Fusion
☆37Aug 12, 2015Updated 10 years ago
Alternatives and similar repositories for SNFtool
Users that are interested in SNFtool are comparing it to the libraries listed below
Sorting:
- This is a read-only mirror of the CRAN R package repository. SNFtool — Similarity Network Fusion☆24Jun 11, 2021Updated 4 years ago
- Convolutional neural networks for extracting a "deep stroma score" from histological images of human cancer☆17Apr 16, 2020Updated 5 years ago
- sparse Canonical Correlation Analysis☆29Sep 28, 2017Updated 8 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Nov 30, 2018Updated 7 years ago
- ☆25Oct 9, 2020Updated 5 years ago
- Online material and code base for the article Coordinates and Intervals in Graph Based Reference Genomes☆11May 2, 2017Updated 8 years ago
- Detection of structural variants in cancer mate-pair and paired-end data☆13May 3, 2019Updated 6 years ago
- NiPTUNE. A Python library for NIPT analyses.☆12Nov 22, 2021Updated 4 years ago
- Load bioinformatics datasets into a local database☆11Apr 8, 2025Updated 10 months ago
- MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.☆14Jul 23, 2020Updated 5 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Jan 4, 2018Updated 8 years ago
- Code for the in-dev PrediXcan Project☆28Oct 17, 2022Updated 3 years ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 4 years ago
- FM-index representation of a de Bruijn graph☆26Aug 7, 2017Updated 8 years ago
- igraph.org web site☆18Dec 26, 2025Updated 2 months ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆18Mar 23, 2020Updated 5 years ago
- Open-source software pipeline for cancer classification from high-throughput data using machine learning.☆19Feb 19, 2019Updated 7 years ago
- Tools for bam file processing☆55Apr 20, 2015Updated 10 years ago
- Calculate cluster similarity between clusters from different single cell datasets/batches/samples.☆25Feb 2, 2026Updated last month
- Understanding sequence conservation with deep learning☆20Mar 19, 2017Updated 8 years ago
- VoxHunt: Resolving human brain organoid heterogeneity through single-cell genomic comparison to spatial brain maps☆47Mar 1, 2024Updated 2 years ago
- Inference of switch-like differential expression along single-cell trajectories☆22Oct 24, 2017Updated 8 years ago
- ☆26Sep 8, 2020Updated 5 years ago
- Generative Modeling of Multivariate Relationships☆27Dec 4, 2023Updated 2 years ago
- ☆27Jun 5, 2025Updated 8 months ago
- Docker for MetaboAnalyst 4.0☆24Nov 16, 2020Updated 5 years ago
- cfDNA cell type of origin estimation☆34Oct 19, 2023Updated 2 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Jul 10, 2023Updated 2 years ago
- JSON-based FON (Feature Object Notation) format and tools to simplify genomic annotations usage☆13Jun 11, 2025Updated 8 months ago
- A comprehensive command-line based pipeline for the analysis of direct injection FT-ICR mass spectrometry data☆12Feb 18, 2026Updated last week
- The Model SEED is a tool for building, curating, and analyzing gonome-scale metabolic models. Visit the Model SEED homepage for installat…☆21Jan 3, 2013Updated 13 years ago
- Source code for the Bioconductor website☆32Updated this week
- ☆32May 2, 2024Updated last year
- ☆69May 2, 2018Updated 7 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Apr 13, 2021Updated 4 years ago
- A 3-day R course given in University College Cork that encompasses various elements off reproducible research facilitated through RStudio…☆11Jun 17, 2020Updated 5 years ago
- Dissemination of harmonization code and data for SDI Health surveys☆10Mar 2, 2019Updated 6 years ago
- R package for Bioconductor submission☆38Dec 8, 2022Updated 3 years ago