NEFF Calculator and MSA File Converter
☆16May 6, 2026Updated 5 months ago
Alternatives and similar repositories for NEFFy
Users that are interested in NEFFy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Just another minhash implementation.☆13Updated this week
- Python program, based on Prody, for pathogenicity prediction of human missense variants☆10Jun 29, 2021Updated 5 years ago
- Tool repository for CAR-PNN☆14Oct 7, 2026Updated 3 weeks ago
- ARA.v1.6.0☆10Jun 9, 2024Updated 2 years ago
- Differentiable Pairing using Soft Scores☆11May 20, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆33Jan 17, 2023Updated 3 years ago
- Python package for handling ModelCIF mmCIF and BinaryCIF files☆14Oct 7, 2026Updated 3 weeks ago
- A flexible and fast sgRNA counter from FASTQ Files☆12Jun 17, 2026Updated 4 months ago
- ☆10Aug 15, 2024Updated 2 years ago
- Protein Structure Archiver☆16Sep 10, 2025Updated last year
- 🧪 Optimized protocol for m6A-SAC-seq☆13Jun 16, 2025Updated last year
- ☆15Jul 14, 2025Updated last year
- Fast protein domain structure embedding+search tool☆31Sep 21, 2025Updated last year
- ☆14Sep 1, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆32Jul 31, 2026Updated 2 months ago
- HiDeF (Hierarchical community Decoding Framework)☆15Jan 30, 2024Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆16Sep 16, 2025Updated last year
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- My BS. Thesis: On Operation Of Brain Neurons In Autism: Multi-agent Reinforcement Learning Approach☆12Sep 23, 2021Updated 5 years ago
- k-mers and the like☆22Oct 18, 2026Updated last week
- A structure-based, alignment-free embedding approach for proteins. Can be used as input to machine learning algorithms.☆42Jun 8, 2023Updated 3 years ago
- Smart Contract of Airbloc Token (ABL) 💵☆13Jul 11, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆19Nov 8, 2022Updated 3 years ago
- High throughput tool for tall and wide multiple sequence alignment.☆32Oct 20, 2026Updated last week
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 10 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆22Nov 7, 2025Updated 11 months ago
- Toolkit for establishing, updating, and validating GTDB species clusters☆20Updated this week
- Mutation-centric "Interaction Language Model" for Edgetic PPI prediction☆16Sep 4, 2026Updated last month
- ☆14Apr 25, 2026Updated 6 months ago
- Umap is a Python library that transforms OpenStreetMap data into customized maps with minimal code. Create minimalist or multi-layered ma…☆19Updated this week
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆29Feb 26, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆84Aug 22, 2025Updated last year
- mmCIF-based extension dictionary for computed structure models☆24Feb 5, 2026Updated 8 months ago
- End-guided RNA assembler☆15Dec 2, 2025Updated 10 months ago
- Gene Expression Decomposition and Integration☆21Feb 9, 2026Updated 8 months ago
- A Quantum Circuit Composer & Simulator In Mojo 🔥⚛️☆16Jun 29, 2025Updated last year
- ☆21Jul 16, 2024Updated 2 years ago
- ☆12Mar 12, 2026Updated 7 months ago