Kirk3gaard / 2025-Crowdsource-GPU-basecalling-statsLinks
A repository for collecting GPU basecalling stats
☆74Updated last month
Alternatives and similar repositories for 2025-Crowdsource-GPU-basecalling-stats
Users that are interested in 2025-Crowdsource-GPU-basecalling-stats are comparing it to the libraries listed below
Sorting:
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆54Updated last year
- Interactive quality assessment of genome assemblies☆116Updated this week
- Reorients assembled microbial sequences☆131Updated 3 months ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆145Updated 4 months ago
- A toolbox for comparative genomics.☆107Updated 4 years ago
- Foreign Contamination Screening caller scripts and documentation☆152Updated 9 months ago
- DDBJ Fast Annotation and Submission Tool☆83Updated 3 months ago
- ☆84Updated 2 years ago
- Split k-mer analysis – version 2☆101Updated 2 months ago
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆184Updated 3 weeks ago
- A tool for Racon polishing of miniasm assemblies☆78Updated 3 months ago
- A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing☆51Updated 2 weeks ago
- Sorts amplicons from Nanopore sequencing data based on similarity☆40Updated 2 months ago
- Precise host read removal☆110Updated 3 months ago
- A pipeline for running AMRfinderPlus and collating results into functional classes☆90Updated 2 weeks ago
- Nanomotif - a tool for identifying methylated motifs in metagenomic samples☆34Updated 3 weeks ago
- A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing☆69Updated 4 years ago
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆107Updated 2 years ago
- a collection of scripts for organising bacterial genomes by species☆81Updated 3 years ago
- Graph-based assembly phasing☆90Updated 3 weeks ago
- A tool for removing redundant genomes from a set of assemblies☆77Updated 3 months ago
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆116Updated last week
- GUI for inspecting POD5 files☆34Updated last year
- Bioinformatics tool to find integrons in bacterial genomes☆82Updated 7 months ago
- Prediction of prophages from bacterial genomes☆81Updated 6 months ago
- Bifrost graph gene caller.☆96Updated 2 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆81Updated last week
- A tool for generating consensus long-read assemblies for bacterial genomes☆206Updated last month
- Metagenomic classification of long-read sequencing data☆97Updated 3 weeks ago
- FastOMA is a scalable software package to infer orthology relationship.☆86Updated this week