snakemake workflow for bulk RNA-seq workflow using STAR-edgeR
☆13Feb 19, 2026Updated last week
Alternatives and similar repositories for rnaseq_workflow
Users that are interested in rnaseq_workflow are comparing it to the libraries listed below
Sorting:
- A pipeline to identify gene family using mutiple tools and scripts.☆11Aug 22, 2021Updated 4 years ago
- ☆12Dec 7, 2020Updated 5 years ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL.☆14Nov 29, 2013Updated 12 years ago
- RNA-seq workflow for Snakemake based on STAR and featureCounts.☆23May 25, 2019Updated 6 years ago
- fastx-utils using klib☆20Sep 1, 2020Updated 5 years ago
- ☆11Jul 3, 2022Updated 3 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆21Jan 30, 2026Updated last month
- ☆28Jan 6, 2026Updated last month
- Scripts and files for the annual Short Read Analysis Workshop☆12Jul 21, 2025Updated 7 months ago
- Versatile FASTA/FASTQ demultiplexer.☆33May 29, 2024Updated last year
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Apr 4, 2025Updated 10 months ago
- A simple variant calling and annotation pipeline using BWA, GATK and ENSEMBL. This version of the pipeline uses the Rubra/Ruffus framewor…☆34Mar 18, 2014Updated 11 years ago
- A single-cell transcriptomic analysis of endometriosis, endometriomas, eutopic endometrial samples and uninvolved ovary tissues highlight…☆18Jan 12, 2023Updated 3 years ago
- 업무자동화를 위한 Python 강의를 듣고 정리한 자료☆13Oct 10, 2017Updated 8 years ago
- mesa package for Methylation Enrichment Sequencing Analysis☆15Nov 20, 2025Updated 3 months ago
- Tools for Unmixing Spectral Flow Cytometry Data☆19Updated this week
- ☆10May 31, 2022Updated 3 years ago
- ☆10Aug 29, 2023Updated 2 years ago
- Cell Heterogeneity Accounted cLonal Methylation (CHALM)