apcamargo / tspexLinks
tspex: tissue-specificity calculator
☆34Updated 2 years ago
Alternatives and similar repositories for tspex
Users that are interested in tspex are comparing it to the libraries listed below
Sorting:
- Evolutionary Transcriptomics with R☆49Updated this week
- A script to make downloading of SRA/GEO data easier☆31Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- ☆23Updated 4 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆51Updated 5 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- BiSulfite Bolt - A Bisulfite Sequencing Alignment and Processing Tool☆24Updated 2 years ago
- visual analysis of your VCF files☆38Updated 2 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆35Updated 4 months ago
- ☆33Updated this week
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- A library for counting small kmer frequencies in nucleotide sequences.☆28Updated last year
- ☆17Updated 3 months ago
- ☆37Updated last year
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- pathway based data integration and visualization☆42Updated 7 months ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated last year
- ☆15Updated 3 years ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 6 months ago
- Long-read Isoform Quantification and Analysis☆38Updated 7 months ago
- A python package and a set of shell commands to handle GTF files☆49Updated last year
- An efficient way to guess the library type of your RNA-Seq data.☆33Updated 3 years ago
- Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.☆30Updated last year
- microRNA PREdiction From small RNA-seq data☆29Updated 7 years ago
- ☆17Updated 4 months ago
- ☆38Updated 2 years ago
- ☆21Updated last year
- Phylogenetic analysis of multi-species genome sequence alignments to identify conserved protein-coding regions☆69Updated 2 years ago