Main repository for Drews et al. (Nature, 2022)
☆43Aug 14, 2023Updated 2 years ago
Alternatives and similar repositories for Drews2022_CIN_Compendium
Users that are interested in Drews2022_CIN_Compendium are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quantifying copy number signatures from absolute copy number profiles☆27Jul 23, 2025Updated 10 months ago
- ☆11Apr 25, 2024Updated 2 years ago
- ☆27May 1, 2026Updated 3 weeks ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- GeneDMRs is an R package to detect the differentially methylated regions based on genes, gene body, CpG islands and gene body interacted …☆10Nov 18, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- cfDNAPro specializes in standardized and robust cfDNA fragmentomic analysis☆42Feb 14, 2026Updated 3 months ago
- Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes☆44Apr 16, 2021Updated 5 years ago
- Automate Absolute Copy Number Calling using 'ABSOLUTE' package☆40Nov 28, 2023Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆42Jan 30, 2023Updated 3 years ago
- Repository of the pipeline of computational methods for logical modelling of biological networks that are deregulated in diseases, develo…☆10Mar 14, 2026Updated 2 months ago
- CNApp represents the first web tool to perform a comprehensive and integrative analysis of copy number alterations (CNAs) in a user-frien…☆20Jan 17, 2020Updated 6 years ago
- R package and Shiny app providing functions for scaling relative copy number to absolute values for shallow whole genome sequencing of ca…☆12Aug 29, 2025Updated 8 months ago
- 肿瘤突变负荷学习笔记（tumor mutation burden）☆16Dec 10, 2019Updated 6 years ago
- ☆14Oct 9, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- R package for extracting mutation signatures from a list of somatic mutations☆37Aug 9, 2019Updated 6 years ago
- Battenberg R package for subclonal copynumber estimation☆95May 11, 2026Updated 2 weeks ago
- ☆126Sep 5, 2023Updated 2 years ago
- This is code for running Orthofinder -> PAML☆13Jul 27, 2016Updated 9 years ago
- ☆79Jul 12, 2023Updated 2 years ago
- CALDER (Cancer Analysis of Longitudinal Data through Evolutionary Reconstruction) reconstructs evolutionary trees from longitudinal bulk …☆15Nov 28, 2023Updated 2 years ago
- Search for activating regulatory variants in the tumor genome☆15Apr 11, 2025Updated last year
- ☆12Sep 22, 2025Updated 8 months ago
- R pkg for Hierarchical Dirichlet Process☆85Jul 18, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Nov 24, 2022Updated 3 years ago
- LORIS: A LOgistic Regression-based Immunotherapy-response Score☆16Nov 18, 2024Updated last year
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆21Sep 8, 2023Updated 2 years ago
- ASCAT R package☆200Feb 12, 2026Updated 3 months ago
- Genome Assembly 102☆18Apr 23, 2025Updated last year
- A pan-cancer genome-wide analysis reveals tumour dependencies by induction of nonsense-mediated decay☆15Nov 2, 2020Updated 5 years ago
- R code for Combining gene mutation with gene expression data improves outcome prediction in myelodysplastic syndromes☆13Mar 23, 2016Updated 10 years ago
- High-definition reconstruction of clonal composition from next-generation sequencing data☆44Jun 10, 2016Updated 9 years ago
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆15Mar 13, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Jul 13, 2018Updated 7 years ago
- Mutational signature analysis for low statistics SNV data☆66Aug 7, 2024Updated last year
- Easy Copy Number !☆21Aug 27, 2025Updated 8 months ago
- A curated list of awesome clonality and tumor heterogeneity resources☆15Jun 25, 2019Updated 6 years ago
- Haplotype-based somatic genome simulator☆10Apr 20, 2026Updated last month
- ☆17May 22, 2025Updated last year
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Sep 12, 2019Updated 6 years ago