husonlab / dendroscope3
Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks
☆44Updated last year
Alternatives and similar repositories for dendroscope3:
Users that are interested in dendroscope3 are comparing it to the libraries listed below
- Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.☆47Updated 3 years ago
- Reduced Alphabet based Protein similarity Search☆40Updated 4 years ago
- A phylogeny dating method using least-squares algorithms and criteria☆26Updated 6 months ago
- Browser-based utility for phylogenetic tree visualisation.☆38Updated last year
- The Biological Observation Matrix (BIOM) Format Project☆94Updated 4 months ago
- A toolkit for analyzing and visualizing phylogenetic placement data☆60Updated 2 months ago
- Time-resolved metagenomic sequencing of Lenski's long-term evolution experiment with Escherichia coli☆23Updated 6 years ago
- ☆26Updated 4 years ago
- PacBio hybrid error correction through iterative short read consensus☆61Updated 5 years ago
- Massively parallel phylogenetic placement of genetic sequences☆83Updated 2 years ago
- R We There Yet?☆30Updated last month
- A toolkit for annotation of transposable element families from unassembled sequence reads☆30Updated 2 years ago
- Phylogenetic and taxonomic analysis for genomes and metagenomes☆81Updated 9 years ago
- Inference of microbial interaction networks from large-scale heterogeneous abundance data☆80Updated 10 months ago
- Clustering phylogenetic trees with python☆25Updated 8 months ago
- Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI☆50Updated 4 years ago
- ⛓ Long Interval Nucleotide K-mer Scaffolder☆74Updated 3 weeks ago
- Ancestral character reconstruction and visualisation for rooted phylogenetic trees☆32Updated this week
- SHallow shOtGUN profiler☆53Updated 3 years ago
- rhierbaps: R implementation of hierBAPS☆34Updated 3 years ago
- R package for searching, downloading and analysis of EBI MGnify metagenomics data☆21Updated last week
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise the contents of genome assembly data sets as a …☆46Updated 2 years ago
- Bioinformatics Pipeline and Visualization resources☆55Updated 7 months ago
- Rapid and scalable homolog identification for bacterial genomes☆33Updated 5 years ago
- Population and Evolutionary Genetics Analysis System☆28Updated last month
- De novo estimates of genetic relatedness from next-gen sequencing data☆45Updated 5 years ago
- mPTP - a tool for single-locus species delimitation☆27Updated last year
- FAST: Fast Analysis of Sequences Toolbox☆31Updated 5 years ago
- Reconstruction of transmission trees using genomic data☆62Updated last year
- A scalable bacterial genome assembly, annotation and analysis pipeline☆73Updated last year