R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)
☆17Mar 22, 2026Updated 3 weeks ago
Alternatives and similar repositories for Quartet
Users that are interested in Quartet are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Quartet Sampling method for phylogenetic branch support evaluation☆19Feb 26, 2024Updated 2 years ago
- Library for analyzing and manipulating phylogenetic trees☆15Apr 4, 2026Updated last week
- Phylogenetic ANalyses of DiversificAtion☆27Jan 27, 2026Updated 2 months ago
- DPPDIV☆12Apr 10, 2020Updated 6 years ago
- Phylogenetic penalized likelihood☆55Jun 27, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Calculate distances between phylogenetic trees in R☆36Apr 1, 2026Updated 2 weeks ago
- Code for computing various support scores for internodes☆19Apr 7, 2020Updated 6 years ago
- R library for analyzing, time-scaling and simulating phylogenies of extinct/fossil lineages. Also plots diversity curves for stratigraphi…☆22Apr 1, 2026Updated 2 weeks ago
- Synteny matrix representation with maximum likelihood pipeline☆16Jul 7, 2021Updated 4 years ago
- Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language☆80Updated this week
- Browser-based utility for phylogenetic tree visualisation.☆40Feb 4, 2026Updated 2 months ago
- Exploring the Phylogenetic Signal in Continuous Traits☆19Jun 10, 2025Updated 10 months ago
- Bash scripts for analysis of Hyb-Seq data (from raw reads to species trees/networks)☆20Mar 20, 2026Updated 3 weeks ago
- ☆17Oct 21, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆71Mar 10, 2021Updated 5 years ago
- ☆16Feb 20, 2024Updated 2 years ago
- Spread visualizes how viruses and other pathogens are spreading in time and space. It creates compellable shareable, interactive and time…☆20Jan 23, 2025Updated last year
- A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf s…☆23Aug 19, 2021Updated 4 years ago
- The PBDB Data Service, API and table/system maintenance scripts☆12Updated this week
- Lightweight header-only C++ library for loading and traversing trees☆24Mar 9, 2025Updated last year
- Biogeographic regionalization and spatial conservation☆20Jul 14, 2025Updated 9 months ago
- Python version of PHLAWD☆21Oct 28, 2024Updated last year
- A suite of methods and models for studying evolutionary radiations☆25Feb 22, 2023Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆45Sep 5, 2023Updated 2 years ago
- spruceup☆25Aug 15, 2025Updated 8 months ago
- Analysis of Phylogenetics and Evolution☆73Apr 2, 2026Updated last week
- Accurate Species TRee ALgorithm☆277Apr 1, 2024Updated 2 years ago
- ☆26Jan 26, 2026Updated 2 months ago
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆37Jan 3, 2026Updated 3 months ago
- A Rust-based library for phylogenetic analysis and manipulation☆17Feb 10, 2026Updated 2 months ago
- Create, modify and analyse phylogenetic trees in R☆23Apr 1, 2026Updated 2 weeks ago
- Visualing species tree from ASTRAL with gene tree discordance☆30May 13, 2025Updated 11 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A directory of scripts that utilize the Paleobiology Database☆16Sep 4, 2019Updated 6 years ago
- A program for multimodel inference on speciation and trait evolution☆35Sep 4, 2017Updated 8 years ago
- a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies☆84Updated this week
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 4 months ago
- Leaping through tree space: continuous phylogenetic inference for rooted and unrooted trees☆12Sep 6, 2023Updated 2 years ago
- Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks☆48Apr 28, 2025Updated 11 months ago
- Posterior summarisation in Bayesian phylogenetics☆70Sep 27, 2025Updated 6 months ago