Wytamma / beastiaryLinks
Real time and remote MCMC trace monitoring with BEASTIARY.
☆21Updated 7 months ago
Alternatives and similar repositories for beastiary
Users that are interested in beastiary are comparing it to the libraries listed below
Sorting:
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 8 years ago
- Fast, scalable, accurate and accessible Bayesian phylogenetics☆40Updated 2 weeks ago
- ☆12Updated 6 years ago
- Scalable relaxed clock phylogenetic dating☆27Updated 3 months ago
- ☆19Updated last year
- Estimating time trees from very large phylogenies☆28Updated last year
- Bacterial phylogenetics in BEAST 2.☆18Updated 2 years ago
- A phylogeny dating method using least-squares algorithms and criteria☆30Updated last year
- Efficient and fast querying and parsing of GTDB's data☆29Updated 3 months ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 5 years ago
- Tutorial on Bayesian phylogenetic analysis☆51Updated 8 years ago
- Phylogenetic maximum representation sampling: choosing most representative strains or taxa☆40Updated 2 months ago
- Reconstruction of transmission trees using genomic data☆68Updated 2 years ago
- Nextstrain build for avian influenza viruses☆27Updated last week
- An community curated awesome list of tools, software, databases and other resources for working/analysing RNA Viruses☆21Updated 4 months ago
- R Data Exploration for Serratus☆15Updated 2 years ago
- Quality control for phylogenetic analyses☆13Updated last week
- ☆21Updated last week
- map Illumina metagenomes to genomes!☆38Updated this week
- Consensus sequences for U.S. H5N1 clade 2.3.4.4b☆36Updated this week
- ☆20Updated 8 months ago
- A collection of documented examples using TreeTime☆22Updated 6 years ago
- Inference of putative transmission phylogenetic clusters☆12Updated 5 years ago
- Phylodynamic inference☆21Updated 5 years ago
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆15Updated 9 months ago
- ☆18Updated last year
- Influenza data pipeline to automate genotyping assignment☆37Updated 2 months ago
- An `R` package for various phylogenetic and evolutionary biology data manipulations☆12Updated 7 years ago
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆12Updated last year
- Cluster Investigation & Virus Epidemiology Tool☆50Updated 6 months ago