karlnicholas / GeneDocLinks
A Full Featured Multiple Sequence Alignment Editor.
☆25Updated 7 years ago
Alternatives and similar repositories for GeneDoc
Users that are interested in GeneDoc are comparing it to the libraries listed below
Sorting:
- showTree can visualize the phylogeny, protein sequences and protein domains of a gene family in one figure.☆31Updated 6 years ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching☆34Updated 8 years ago
- ☆17Updated last year
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 6 months ago
- A richly featured desktop platform for data analysis of bioinformatics. Especially, for quick sequence annotation and mutation analysis o…☆31Updated 9 months ago
- Evolcust retrieves groups of genes that appear clustered together in groups of species☆16Updated 2 years ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆13Updated 2 years ago
- ☆38Updated last year
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 5 years ago
- Scalable Maximum Likelihood Estimation of Phylogenetic Models☆17Updated 5 months ago
- Bash scripts and data used in pantranscriptomic paper☆24Updated 2 years ago
- Synteny Mapping and Analysis Program☆27Updated 2 weeks ago
- Influenza genome analysis Nextflow workflow☆28Updated last month
- A tool for scanning FASTA protein sequences against a library of Pfam HMMs☆16Updated 3 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 9 months ago
- Whole organelle genome-wide alignment construction method, which ultilizes BLAST tool, to facilitate phylogeny analysis☆11Updated 7 years ago
- ALignment Transformation EnviRonment☆11Updated 7 years ago
- Automatically exported from code.google.com/p/prank-msa☆28Updated 5 months ago
- collection of bioinformatic scripts☆31Updated last year
- Find reciprocal best hits (DIAMOND or BLAST) between two (or more!) sets of sequences.☆13Updated last year
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆23Updated 2 months ago
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆31Updated 3 years ago
- Primer3Plus is an advanced web interface for primer3.☆37Updated 4 months ago
- ☆16Updated last month
- A program for divvying or partially filtering multiple sequence alignments☆27Updated 5 years ago
- An R package to infer and analyze synteny networks from protein sequences☆30Updated last month
- STRIDE: Species Tree Root Inference from Gene Duplication Events☆12Updated 7 years ago
- TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly☆27Updated 3 years ago
- Pipeline for metagenomic community analysis using DNA isolated from virus-like particles☆13Updated 5 years ago