forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research
☆42Jun 24, 2026Updated 2 weeks ago
Alternatives and similar repositories for forester
Users that are interested in forester are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.☆41Apr 22, 2026Updated 2 months ago
- GPU-accelerated DNA barcode classification☆14Jan 2, 2025Updated last year
- que paquete☆10Jul 17, 2024Updated last year
- ☆14Mar 28, 2018Updated 8 years ago
- Repository of our application for human-augmented binning☆27Apr 26, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks☆49Apr 28, 2025Updated last year
- Posterior summarisation in Bayesian phylogenetics☆73Sep 27, 2025Updated 9 months ago
- baltic - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. This fork will no longe…☆12Dec 18, 2019Updated 6 years ago
- The Dinucleotide Quantification Python Package☆11Mar 12, 2022Updated 4 years ago
- This is a simple introductory tutorial to help you get started with using BEAST2 and its accomplices.☆11Jul 8, 2025Updated last year
- Ancestral Sequence Reconstruction in Python☆15May 9, 2019Updated 7 years ago
- Datamonkey - Run state-of-the-art statistical models through the comfort of your browser☆10Jun 30, 2026Updated last week
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Oct 27, 2020Updated 5 years ago
- DFAST Quality Control: Taxonomy and completeness check☆18Jun 17, 2026Updated 3 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆29Apr 18, 2023Updated 3 years ago
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Jun 26, 2024Updated 2 years ago
- A new graphical interface for RAxML☆23Jun 25, 2026Updated last week
- Utility to analyse a group of closely related MAgs/Genomes/bins/SUBs of more or less dubious origin☆15Sep 24, 2024Updated last year
- EMIRGE reconstructs full length ribosomal genes from short read sequencing data.☆38Sep 15, 2023Updated 2 years ago
- interactive phylogenetic tree viewer☆11Jun 26, 2024Updated 2 years ago
- Metagenomic binning suite☆29Sep 30, 2022Updated 3 years ago
- An automated pipeline for retrieving orthologous DNA sequences from GenBank in R☆25Mar 20, 2026Updated 3 months ago
- R package for microbial pangenomics☆24Apr 12, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- long-read depth breaking☆12Apr 19, 2018Updated 8 years ago
- Python tool to reduce size and redundancy of phylogenetic datasets☆56Dec 5, 2025Updated 7 months ago
- SUPBUB is a tool that, in linear time, finds out superbubbles(special graph-structures) in a directed graph.☆12Sep 19, 2019Updated 6 years ago
- Calculation of the Percentage of Conserved Proteins following Qin, Xie et al. 2014 but using DIAMOND instead of BLASTP for alignments.☆28Apr 28, 2025Updated last year
- coevol -- Correlated evolution of substitution rates and quantitative traits☆13Oct 18, 2024Updated last year
- R Interfaces to Phylogenetic Software☆12Jun 25, 2026Updated last week
- GTDB => NCBI☆15Nov 14, 2024Updated last year
- ☆12Feb 26, 2024Updated 2 years ago
- a toolbox for utilize organelle genomic data☆25May 18, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Docker containers that demonstrate a proof of concept bwa alignment workflow