Alternatives and similar repositories for MultiTypeTree

Users that are interested in MultiTypeTree are comparing it to the libraries listed below

• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆27Updated 2 months ago
• FePhyFoFum / PyPHLAWD
  Python version of PHLAWD
  ☆21Updated last year
• emvolz-phylodynamics / treestructure
  ☆18Updated last month
• duchene / phylomad
  ☆19Updated last year
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆42Updated 3 months ago
• liamrevell / learnPopGen
  initial commit
  ☆26Updated 2 years ago
• macroevolution / bamm
  A program for multimodel inference on speciation and trait evolution
  ☆34Updated 8 years ago
• MaikeMorrison / FSTruct
  ☆13Updated 2 years ago
• caraweisman / abSENSE
  Code to perform homolog detectability analyses as described in Weisman et al. 2020 (https://www.biorxiv.org/content/10.1101/2020.02.27.96…
  ☆17Updated last year
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 2 months ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆19Updated 5 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆36Updated last year
• CMPG / signet
  An R package to detect selection in biological pathways
  ☆14Updated last year
• mdkarcher / phylodyn
  ☆19Updated 4 years ago
• dorolin / rearrvisr
  An R package to detect, classify, and visualize genome rearrangements
  ☆15Updated 5 years ago
• phylogeography / SpreaD3
  Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3
  ☆16Updated 2 years ago
• danlwarren / RWTY
  R We There Yet?
  ☆31Updated 7 months ago
• weissmanlab / magic
  Minimal Assumption Genomic Inference of Coalescence
  ☆14Updated 2 years ago
• nmatzke / BEASTmasteR
  R code for writing Beast2 XML (especially morphology/tip-dating)
  ☆11Updated last year
• bodkan / admixr
  An R package for reproducible and automated ADMIXTOOLS analyses
  ☆34Updated this week
• bodkan / slendr
  Population genetic simulations in R 🌍
  ☆61Updated last week
• stevemussmann / BayesAss3-SNPs
  Modification of BayesAss 3.0.4 to allow handling of large SNP datasets
  ☆17Updated 3 years ago
• hmorlon / PANDA
  Phylogenetic ANalyses of DiversificAtion
  ☆24Updated last week
• GuangchuangYu / plotTree-ggtree
  ggtree version of plotTree.R
  ☆18Updated 7 years ago
• augusto-garcia / onemap
  Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…
  ☆38Updated last year
• helixcn / phylotools
  Phylogenetic tools for Eco-phylogenetics
  ☆13Updated last year
• CBC-UCONN / Genome_Assembly
  ☆24Updated 7 months ago
• hemstrow / snpR
  ☆31Updated 2 months ago
• pblischak / polyploid-genotyping
  SNP genotyping in polyploids
  ☆17Updated 5 years ago