ocbe-uio / DIscBIOLinks
A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
☆13Updated 2 years ago
Alternatives and similar repositories for DIscBIO
Users that are interested in DIscBIO are comparing it to the libraries listed below
Sorting:
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆17Updated 5 years ago
- Core utilities for single-cell RNA-seq☆12Updated 7 months ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- ☆25Updated 6 months ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 3 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated last month
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 5 years ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15Updated 7 months ago
- Gene orthologs for model organisms in a tidy data format☆14Updated 3 years ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆14Updated last year
- Gene-level general linear mixed model☆23Updated 2 months ago
- ☆17Updated last year
- Explore the cancer relevance of your gene list☆52Updated last week
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Updated 3 months ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated 2 weeks ago
- Hierarchical Random Forest for Information Transfer☆13Updated 4 years ago
- VirusScan Pipeline☆11Updated 10 months ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Updated 7 years ago
- Calibrated clustering via knockoffs for single-cell genomics☆10Updated 9 months ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Updated last year
- Toolbox package for organizing and working with TCGA data☆28Updated this week
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 8 months ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated last week
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- Analysis tools for longevity research☆20Updated 8 years ago
- OmicSelector - Environment, docker-based application and R package for biomarker signiture selection (feature selection) & deep learning …☆35Updated last month
- Pipeline for the identification of cancer-related mutations from RNA-seq data☆14Updated 4 years ago
- ☆15Updated 2 years ago