Alternatives and similar repositories for compact_vector:

Users that are interested in compact_vector are comparing it to the libraries listed below

• ocxtal / rbread
  Header-only, gzread-like reader for gzip, bz2, and xz.
  ☆12Updated 6 years ago
• dominikkempa / faster-minuter
  Wavelet tree based on a fixed block boosting technique
  ☆16Updated 3 years ago
• bingmann / cobs
  COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)
  ☆83Updated 11 months ago
• Poyias / mBonsai
  Compact Tree Representation
  ☆16Updated 7 years ago
• attractivechaos / udb3
  ☆15Updated last week
• jermp / lphash
  Fast and compact locality-preserving minimal perfect hashing for k-mer sets.
  ☆43Updated last year
• nicolaprezza / BWTIL
  BWT Text Indexing Library: a set of tools to work with BWT-based text indexes
  ☆25Updated 2 years ago
• ekg / mmmulti
  memory mapped multimap, multiset, and implicit interval tree based on an in-place parallel sort
  ☆27Updated 3 years ago
• jamshed / CaPS-SA
  Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays
  ☆10Updated 4 months ago
• drnatebrown / r-index-f
  R-Index-F Library for Pattern Matching
  ☆13Updated 5 months ago
• splatlab / mantis
  Mantis: A Fast, Small, and Exact Large-Scale Sequence-Search Index
  ☆81Updated 10 months ago
• jermp / sshash
  A compressed, associative, exact, and weighted dictionary for k-mers.
  ☆86Updated 3 months ago
• mohsenzakeri / Movi
  Fast and cache-efficient full-text pangenome index
  ☆27Updated this week
• jltsiren / bwt-merge
  A tool for merging large BWTs
  ☆26Updated 4 years ago
• refresh-bio / RADULS
  Ultra fast MSD radix sorter
  ☆11Updated 4 years ago
• justinasvd / art_map
  std::map/std::set implementation using the adaptive radix tree
  ☆13Updated 3 years ago
• cartoonist / kseqpp
  Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
  ☆46Updated 10 months ago
• rob-p / BooM
  A hash map using the BooPHF perfect hash function
  ☆12Updated 8 years ago
• ocxtal / dozeu
  SIMD-parallel BLAST X-drop DP on sequence graphs
  ☆24Updated 7 months ago
• itomomoti / OnlineRlbwt
  Online construction of run-length BWT (RLBWT) and r-index. Plus, online LZ77 parsing based on RLBWT.
  ☆15Updated 6 years ago
• turpinandrew / shuff
  Static Huffman coding
  ☆10Updated 7 years ago
• dib-lab / MQF
  ☆12Updated last year
• davidecenzato / PFP-eBWT
  Implementation of eBWT using Prefix-free parse (PFP)
  ☆12Updated 4 months ago
• nicolaprezza / r-index
  An optimal space run-length Burrows-Wheeler transform full-text index
  ☆61Updated last year
• lh3 / rmaxcut
  An experimental tool to find approximate max-cuts in a large graph
  ☆11Updated 3 years ago
• mklarqvist / libflagstats
  Efficient C functions to compute the summary statistics (flagstats) for sequencing read sets.
  ☆15Updated 5 years ago
• farruggia / bc-zip
  Bicriteria Data Compressor
  ☆14Updated 7 years ago
• vicLeva / bqf
  Implementation of a Backpack Quotient Filter
  ☆11Updated 5 months ago
• noporpoise / string_buffer
  libstrbuf: A powerful string library for C
  ☆17Updated 8 years ago
• dynatrace-research / set-sketch-paper
  SetSketch: Filling the Gap between MinHash and HyperLogLog
  ☆49Updated 3 years ago