GTEx Visualizations
☆66May 3, 2021Updated 4 years ago
Alternatives and similar repositories for gtex-viz
Users that are interested in gtex-viz are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.☆24Sep 4, 2025Updated 7 months ago
- QTL Discovery using Annotations☆29Dec 12, 2022Updated 3 years ago
- Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…☆24Apr 25, 2023Updated 2 years ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 6 months ago
- A study to compare methods for clustering of scRNA-seq data☆47Jul 19, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 3 years ago
- A JBrowse 1 plugin to view multiple alignment format (MAF) files☆27Oct 25, 2023Updated 2 years ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆47Dec 16, 2024Updated last year
- Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)☆10Jan 26, 2026Updated 2 months ago
- ☆39Apr 25, 2023Updated 2 years ago
- WebGL-based viewer for spatially-resolved transcriptomics data☆28Jan 6, 2023Updated 3 years ago
- LocusCompare is an interactive visualization tool for comparing two genetic association datasets.☆21Apr 8, 2023Updated 3 years ago
- Read CRAM v3 and v2 in node or in the browser☆18Mar 28, 2026Updated last week
- Data and code for the Effector index☆14Oct 13, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆14Oct 29, 2021Updated 4 years ago
- Causal Variant Evidence Mapping with Non-parametric resampling☆12Dec 16, 2020Updated 5 years ago
- A Fine-Mapping pipeline☆22Sep 13, 2019Updated 6 years ago
- A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.☆165May 9, 2025Updated 11 months ago
- MrMosaic (Genomic Mosaic Structural Variant Caller)☆15Jul 21, 2017Updated 8 years ago
- BigWig and BAM utilities☆103Mar 26, 2024Updated 2 years ago
- GTEx & TOPMed data production and analysis pipelines☆401Sep 14, 2025Updated 6 months ago
- Code for creating cell-type-specific regulatory element annotation files☆20Jun 11, 2024Updated last year
- Scripts used for generating Neale Lab UKB results☆20Oct 11, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Gene expression viewer template☆11Aug 30, 2017Updated 8 years ago
- Method to detect exonic CNVs in NGS Gene Targeted Panels☆16Dec 3, 2019Updated 6 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆22May 11, 2023Updated 2 years ago
- ☆94Jul 21, 2025Updated 8 months ago
- We aim to make it easier for biomedical researchers to access and customize synthetic sequence data for the purpose of sharing and testin…☆11Jul 22, 2019Updated 6 years ago
- ☆34Mar 7, 2021Updated 5 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Nov 12, 2024Updated last year
- ☆14Aug 30, 2025Updated 7 months ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Analysing Capture Seq Count Data☆13Jun 11, 2018Updated 7 years ago
- A tool to examine duplicate read characteristics in a BAM file☆12Dec 8, 2017Updated 8 years ago
- Interactive table from gemini output☆10Mar 5, 2019Updated 7 years ago
- Genetics training camp☆21Sep 8, 2020Updated 5 years ago
- pandasGWAS: a Python package for easy retrieval of GWAS Catalog data☆17Dec 19, 2025Updated 3 months ago
- Motif Scan and Enrichment Analysis (MoSEA)☆17Oct 6, 2020Updated 5 years ago
- ☆13Apr 18, 2022Updated 3 years ago