broadinstitute / gtex-viz
GTEx Visualizations
☆64Updated 4 years ago
Alternatives and similar repositories for gtex-viz
Users that are interested in gtex-viz are comparing it to the libraries listed below
Sorting:
- ☆68Updated last year
- Collection of CGAT NGS Pipelines☆43Updated 6 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆52Updated last month
- A toolkit for QC and visualization of ATAC-seq results.☆69Updated 4 months ago
- Somatic copy number analysis using WGS paired end wholegenome sequencing☆71Updated 4 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆67Updated last month
- Battenberg algorithm and associated implementation script☆52Updated 4 years ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆92Updated 7 years ago
- A tool for bigWig files.☆119Updated 6 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 6 months ago
- WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery☆103Updated 4 years ago
- ☆69Updated this week
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆46Updated 2 years ago
- simple comparison of snakemake, nextflow and cromwell/wdl☆49Updated 4 years ago
- Allele-specific alignment sorting☆55Updated 2 years ago
- Quality of RNA-Seq Toolset☆53Updated 6 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- R package for bcbio RNA-seq analysis.☆62Updated 8 months ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- ☆116Updated last year
- SalmonTE is an ultra-Fast and Scalable Quantification Pipeline of Transpose Element (TE) Abundances☆86Updated 2 years ago
- nucleosome calling using ATAC-seq☆106Updated 4 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆47Updated last month
- Genomic Interactive Visualization Engine☆145Updated 2 years ago
- Snakemake-based workflow for detecting structural variants in genomic data☆80Updated 3 months ago
- Burden testing against public controls☆50Updated last year
- Tip and tricks for BAM files☆85Updated 6 years ago
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 3 months ago
- Publication quality NGS track plotting☆112Updated 2 years ago