ge11232002 / TFBSToolsLinks
Software Package for Transcription Factor Binding Site (TFBS) Analysis
☆32Updated 10 months ago
Alternatives and similar repositories for TFBSTools
Users that are interested in TFBSTools are comparing it to the libraries listed below
Sorting:
- An R interface to the MEME Suite☆54Updated last week
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- This github repository contains code to reproduce the analysis in our paper "Variability in estimated gene expression among commonly used…☆29Updated 2 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 7 years ago
- Snakemake based pipeline for RNA-Seq analysis☆31Updated 6 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Filtering of PDX samples for mouse derived reads☆28Updated last week
- ☆41Updated 3 years ago
- R package wrapping bedtools☆44Updated 10 months ago
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- Wrapper R scripts for performing a weighted-gene co-expression network analysis (WGCNA)☆30Updated 10 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Reference transcriptome indices build from kallisto for popular organisms☆45Updated 2 years ago
- A toolkit for working with ATAC-seq data.☆24Updated last year
- An R for fast and flexible DNA methylation analysis☆35Updated last month
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 7 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 5 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆95Updated last month
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Identify and correct invalid gene symbols☆61Updated last year
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- Statistical power studies for multi-omics experiments.☆32Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Differential Gene Correlation Analysis☆46Updated last year
- R package for genomic feature analysis and visualization☆79Updated 9 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- R package containing useful functions for mutational signature analysis☆87Updated last week