andymckenzie / DGCA
Differential Gene Correlation Analysis
☆46Updated 9 months ago
Alternatives and similar repositories for DGCA:
Users that are interested in DGCA are comparing it to the libraries listed below
- Workshop • Analysis of RNA-seq data☆35Updated last year
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated 2 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- 🧬 Gene analysis toolkit based on R☆56Updated 3 months ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆36Updated 6 years ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year
- Reference transcriptome indices build from kallisto for popular organisms☆42Updated last year
- Tutorial for AMSI BioInfoSummer 2018☆29Updated 6 years ago
- Time-Course Multi-Omics data integration☆24Updated last year
- Integrative pathway enrichment analysis of multivariate omics data☆109Updated 8 months ago
- Compendium to "A Systematic Evaluation of Single Cell RNA-Seq Analysis Pipelines"☆54Updated 4 years ago
- Multiscale embedded gene co-expression network analysis☆51Updated last year
- ☆38Updated 2 years ago
- Single-cell/nuclei RNA-seq analysis tools in R for a complete workflow.☆56Updated last year
- documentation for trackViewer☆29Updated 5 years ago
- A continually expanding collection of RNA-seq tools☆48Updated 6 months ago
- binned motif enrichment analysis and visualisation☆40Updated last month
- Lightweight Iterative Gene set Enrichment in R☆56Updated 6 months ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Arabidopsis RNA_-seq downstream analysis shiny app☆30Updated 5 years ago
- This package contains a reference-based function to infer the proportions of a priori known cell subtypes present in a sample representin…☆50Updated 5 months ago
- ☆79Updated last year
- The MBatch R package and Docker image are designed to help assess and correct for batch effects.☆16Updated 10 months ago
- ☆53Updated this week
- RNA-seq Quantification of Alternative Polyadenylation☆46Updated last year
- Identify and correct invalid gene symbols☆58Updated 5 months ago
- Filtering of PDX samples for mouse derived reads☆27Updated 2 years ago
- ☆27Updated last year
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆51Updated 7 years ago