R package for genomic feature analysis and visualization
☆79Apr 15, 2025Updated 11 months ago
Alternatives and similar repositories for genomation
Users that are interested in genomation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A lightweight and flexible analysis pipeline☆12Updated this week
- R package for DNA methylation analysis☆250Jan 18, 2026Updated 2 months ago
- Software used to design guide RNA sequences for CRISPR/Cas9 genome editing☆16Apr 13, 2023Updated 2 years ago
- Two locus likelihoods and ARGs under changing population size☆14Dec 18, 2025Updated 3 months ago
- Locus Overlap Analysis: Enrichment of Genomic Ranges☆80Sep 1, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 10 years ago
- Software Package for Transcription Factor Binding Site (TFBS) Analysis☆34Mar 12, 2025Updated last year
- tool for dating gene age by micro- and macro-synteny with high speed and accuracy☆15Jan 3, 2026Updated 3 months ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆12Apr 18, 2025Updated 11 months ago
- ☆10Jan 29, 2020Updated 6 years ago
- Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA data☆11Mar 2, 2022Updated 4 years ago
- Chromatin segmentation in R☆19Feb 4, 2018Updated 8 years ago
- R interface to the JBrowse 2 Linear Genome View.☆39Mar 12, 2024Updated 2 years ago
- Tools for visualizing genomics data☆70Oct 26, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- DEPRECATED Tools for manipulating cell expression format (CEF) files☆12Oct 10, 2017Updated 8 years ago
- ☆354Apr 16, 2025Updated 11 months ago
- A ggplot2 layer for drawing brackets annotated with p-values and significance testing between barplot samples.☆11May 25, 2017Updated 8 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- ☆19Mar 19, 2026Updated 3 weeks ago
- visualization tools for exon/junction coverage☆11Dec 30, 2019Updated 6 years ago
- ☆16Jun 9, 2025Updated 10 months ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Dec 26, 2023Updated 2 years ago
- ☆10Jun 21, 2025Updated 9 months ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- ☆28Mar 15, 2017Updated 9 years ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆365Jun 6, 2025Updated 10 months ago
- Profile and Heatmap Visualization by Using ggplot2 and grid☆12Nov 21, 2023Updated 2 years ago
- This is code for running Orthofinder -> PAML☆12Jul 27, 2016Updated 9 years ago
- ☆13Dec 19, 2018Updated 7 years ago
- This is the R implementation of a robust correlation matrix estimator usefull in case of high-dimensional data to remove the bias. It al…☆14Mar 10, 2019Updated 7 years ago
- ☆16Apr 1, 2026Updated last week
- pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data☆56Dec 11, 2025Updated 4 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Linking GWAS studies to genes through cis-regulatory datasets☆39Feb 11, 2023Updated 3 years ago
- ☆13Nov 15, 2017Updated 8 years ago
- ☆31May 29, 2014Updated 11 years ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated last week
- This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.☆91Jan 23, 2025Updated last year
- Make Pseudo-Reference Genome from VCF/BCF☆14Oct 5, 2020Updated 5 years ago
- Tools to process LIANTI sequence data☆23Feb 20, 2019Updated 7 years ago