pyrevo / ClusterScanLinks
ClusterScan, search for clusters of features in a given annotation.
☆11Updated 4 years ago
Alternatives and similar repositories for ClusterScan
Users that are interested in ClusterScan are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆23Updated 2 months ago
- Mapped QC analysis program☆43Updated 7 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Scripts and software supplement for "Gene-level differential analysis at transcript-level resolution" by Yi, Pimentel, Bray and Pachter☆19Updated 7 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆31Updated 10 months ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated last week
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- Fluff is a Python package that contains several scripts to produce pretty, publication-quality figures for next-generation sequencing exp…☆71Updated last year
- Genomic data interpretation and visualization Workshop☆21Updated 2 months ago
- Genomic plot in trellis layout☆42Updated last week
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- highly-efficient & lightweight mutation signature matrix aggregation☆19Updated 4 years ago
- Population-based detection of structural variation from High-Throughput Sequencing.☆33Updated 3 years ago
- Analysis of RNAseq data from (host-associated) microbial mixtures☆12Updated 6 years ago
- fast webservices based query tool for large sets of genomic features☆25Updated 8 months ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- Flexible Bayesian inference of mutational signatures☆39Updated 3 years ago
- DriverPower☆26Updated last year
- Full-spectrum copy number variation detection by high-throughput DNA sequencing☆40Updated 4 years ago
- Filter and prioritize fusion calls☆20Updated 2 weeks ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago
- ☆33Updated 3 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- A web based tool to manage and automate the processing of publicly available datasets.☆39Updated 4 years ago
- 📊Evaluating, filtering, comparing, and visualising VCF☆28Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week