kkdey / CountClustLinks
A R package for Grade of Membership model and Visualization of counts data:
☆32Updated 5 years ago
Alternatives and similar repositories for CountClust
Users that are interested in CountClust are comparing it to the libraries listed below
Sorting:
- An R Package for Geneset Enrichment Workflows☆76Updated last month
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 3 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- countsimQC - Compare characteristic features of count data sets☆29Updated 2 months ago
- Integrating zingeR with ZINB-WaVE weights☆25Updated 7 years ago
- Differential Expression with Capture Efficiency adjustmeNT☆14Updated 3 years ago
- Exon-Intron Split Analysis (EISA) in R☆17Updated 2 months ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Identify and correct invalid gene symbols☆61Updated last year
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- post-clustering differential expression test☆36Updated 6 years ago
- consistent quantification of external RNA-seq data sets☆58Updated 2 years ago
- ☆63Updated 9 months ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆33Updated 4 months ago
- Transcript quantification import with automatic metadata detection☆67Updated this week
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 3 years ago
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Updated last month
- Normalization for single cell RNA-seq data☆50Updated 7 months ago
- Non-official Git repository for R package cellrangerRkit (currently not available elsewhere; I'm not affiliated with 10x)☆19Updated 6 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Using Bulk Gene Expression to Estimate Cell-Type-Specific Gene Expression via Deconvolution☆47Updated 2 years ago
- Functional genomics and genome-wide association studies☆69Updated 7 years ago
- Bead-based single-cell atac processing☆33Updated 4 years ago