kkdey / CountClustLinks
A R package for Grade of Membership model and Visualization of counts data:
☆32Updated 4 years ago
Alternatives and similar repositories for CountClust
Users that are interested in CountClust are comparing it to the libraries listed below
Sorting:
- R package to identify genes with differential distributions in single-cell RNA-seq☆33Updated 3 years ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 weeks ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- Lightweight Iterative Gene set Enrichment in R☆57Updated last year
- Assorted thoughts, explanations and justifications for code in the scran package and the simpleSingleCell workflow.☆47Updated 2 weeks ago
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Updated 2 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Normalization for single cell RNA-seq data☆48Updated 3 months ago
- Inference of switch-like differential expression along single-cell trajectories☆21Updated 7 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 6 years ago
- R package for reading in & working with NucleoATAC outputs☆26Updated 6 years ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- countsimQC - Compare characteristic features of count data sets☆29Updated 2 months ago
- Workshop for CNV analysis with Bioconductor☆17Updated 9 months ago
- Toolkit for QTL mapping and meta-analysis.☆17Updated 3 years ago
- Differential Expression with Capture Efficiency adjustmeNT☆14Updated 2 years ago
- Transcript quantification import with automatic metadata detection☆67Updated last week
- ☆63Updated 6 months ago
- post-clustering differential expression test☆36Updated 6 years ago
- Clustering cells from single cell RNA seq assays☆46Updated 6 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 3 years ago
- Isoform-level expression patterns in single-cell RNA-sequencing data☆11Updated 2 years ago
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- Linseed: LINear Subspace identification for gene Expresion Deconvolution☆31Updated last month