TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix factorization and population genetics.
☆24Jun 21, 2023Updated 3 years ago
Alternatives and similar repositories for TESS3_encho_sen
Users that are interested in TESS3_encho_sen are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Source code for the program MavericK, described fully at www.bobverity.com/maverick☆12Jun 21, 2018Updated 8 years ago
- Code and binaries related to processing haplotagging data☆16Mar 14, 2022Updated 4 years ago
- A package for population structure inference from RAD-seq data☆36May 14, 2021Updated 5 years ago
- Demographic history from the observed spectrum of linkage disequilibrium☆17Oct 27, 2026Updated last week
- ☆11Jan 14, 2019Updated 7 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ARBitR: Assembly Refinement with Barcode-identity-tagged Reads☆10Oct 22, 2020Updated 6 years ago
- microhaplotype visualizer and analyzer☆23Jun 24, 2021Updated 5 years ago
- Comprehensive, detailed and interactive plots for STRUCTURE and ADMIXTURE population analysis☆24Nov 25, 2024Updated last year
- ☆30Oct 14, 2022Updated 4 years ago
- An R package to help in plotting PCA results nicely.☆12Jan 16, 2020Updated 6 years ago
- Process linked-read data, from raw sequences to phased haplotypes, batteries included. Works with WGS too!☆23Updated this week
- ☆12Dec 6, 2023Updated 2 years ago
- diveRsity: A comprehensive, general purpose population genetics analysis package.☆27Mar 8, 2026Updated 7 months ago
- Collection of Python scripts for parsing/analyses of RAD-seq data☆25Jul 5, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An individual-based, eco-evolutionary model for spatially-explicit simulation of population viability in landscape demogenetics☆15Oct 25, 2026Updated last week
- ☆16Mar 20, 2023Updated 3 years ago
- A statistical framework for reference-free inference of archaic local ancestry☆15Nov 8, 2019Updated 6 years ago
- neural network for estimating demographic maps from SNPs☆13Oct 13, 2026Updated 3 weeks ago
- Tools for data conversion and results visualization for fineRADstructure (http://cichlid.gurdon.cam.ac.uk/fineRADstructure.html)☆10Mar 24, 2020Updated 6 years ago
- Paludamentum is the coat of the emperor - evidence processing pipeline☆11Updated this week
- Work for the tree sequence inference paper.☆24Oct 19, 2020Updated 6 years ago
- misFinder: Identify mis-assemblies in an unbiased manner using reference and paired-end reads☆10Oct 17, 2015Updated 11 years ago
- On synteny plots, intrinsic tangledness is real, layout tangledness is noise. This tool is for removing layout tangledness.☆22Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analyze and simulate Pool-Seq time series data☆18Jun 16, 2022Updated 4 years ago
- run-length BWT tools for genomic sequences☆18May 19, 2022Updated 4 years ago
- Simple and flexible manipulation of genomic data.☆16Apr 16, 2025Updated last year
- A tool for pangenome graph-based phased diploid genome inference.☆10Sep 19, 2026Updated last month
- GONE: Scripts, programs and an example data set☆57May 12, 2026Updated 5 months ago
- R package and web app for spatial visualisation of admixture on a projected map☆48Aug 26, 2026Updated 2 months ago
- Estimating Effective Migration Surfaces☆112Oct 28, 2023Updated 3 years ago
- Species occurrence dot maps in R☆21Mar 22, 2022Updated 4 years ago
- Importing and Analysing DArT type snp and silicodart data☆37Mar 27, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ABLE - Approximate Blockwise Likelihood Estimation☆17Jul 4, 2018Updated 8 years ago
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Aug 21, 2020Updated 6 years ago
- Hybrid Error Correction of Long Reads using Iterative Learning☆10Sep 27, 2018Updated 8 years ago
- Estimation of per-individual inbreeding tracts under a probabilistic framework☆16Aug 11, 2023Updated 3 years ago
- Toolkit for Population Genetic Statistics from Pool-Sequenced Samples, e.g., in Evolve and Resequence experiments☆51Sep 25, 2026Updated last month
- BayesCode, a Bayesian framework for phylogenetic comparative methods and phylogenetic codon models☆11Apr 30, 2025Updated last year
- Align subreads to ccs reads☆14Jun 11, 2025Updated last year