Alternatives and similar repositories for fine-mapping-inf

Users that are interested in fine-mapping-inf are comparing it to the libraries listed below

• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆21Updated 5 months ago
• yiminghu / post-GWAS-pipeline
  A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data
  ☆29Updated 3 years ago
• derekmichaelwright / gwaspr
  An R package for plotting GWAS results from the GAPIT package
  ☆14Updated 3 months ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆41Updated last year
• yuanzhongshang / GIFT
  ☆21Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆35Updated 5 years ago
• bhattacharya-a-bt / isotwas
  ☆24Updated last month
• saralpulit / gwas-scripts
  A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…
  ☆20Updated 8 years ago
• pgxcentre / region-plot
  A tool to plot significant regions of GWAS
  ☆29Updated 3 years ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 3 months ago
• RajLabMSSM / ggLocusZoom
  Create LocusZoom-style plots in R.
  ☆22Updated 2 years ago
• EMO-Consortium / GeneticCorrelation
  ☆12Updated 2 years ago
• ipdgc / Manhattan-Plotter
  This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3
  ☆13Updated 6 years ago
• jinghuazhao / TWAS-pipeline
  TWAS-pipeline
  ☆24Updated 4 years ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆18Updated 11 months ago
• hakha-most / gwas_eqtl
  ☆18Updated 2 years ago
• Jeremy37 / AD_finemap
  Code supporting analyses in paper on fine-mapping AD loci
  ☆16Updated 4 years ago
• swvanderlaan / MetaGWASToolKit
  A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies
  ☆16Updated last month
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆26Updated last year
• GP2code / GP2-Multiancestry-metaGWAS
  ☆12Updated 2 years ago
• mglev1n / locusplotr
  Create Regional Association Plots
  ☆13Updated 5 months ago
• lcpilling / gwasRtools
  R package for processing of GWAS output
  ☆16Updated last year
• mancusolab / twas_sim
  Using real genotype data, simulate a complex trait as a function of latent expression, fit eQTL weights in independent data, and perform …
  ☆29Updated 2 years ago
• statgen / pheweb-rg-pipeline
  Genetic correlation calculation pipeline via summary statistics for PheWeb
  ☆13Updated 6 years ago
• hakyimlab / gtex-gwas-analysis
  ☆24Updated 4 years ago
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆27Updated last year
• opain / Calculating-FUSION-TWAS-weights-pipeline
  This is a pipeline for calculating weights for TWAS
  ☆32Updated 3 years ago
• roman-tremmel / ggfastman
  Fast manhattenplots using ggplot2
  ☆13Updated last year
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆24Updated 7 years ago
• hakyimlab / PredictDB_Pipeline_GTEx_v7
  PredictDB Pipeline for GTEx v7 data
  ☆18Updated 3 years ago