FinucaneLab / fine-mapping-inf
Fine-mapping with infinitesimal effects
☆14Updated 8 months ago
Related projects ⓘ
Alternatives and complementary repositories for fine-mapping-inf
- ☆17Updated last week
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆13Updated 2 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆28Updated 2 years ago
- GWAS genetics Fine-mapping method☆18Updated last month
- ☆19Updated last month
- Estimate genetic correlation using predicted expression☆19Updated 6 years ago
- Create Regional Association Plots☆10Updated 3 months ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆18Updated 2 years ago
- Cross-population fine-mapping☆27Updated 2 weeks ago
- An R package for creating ggplot2 based miami plots.☆16Updated 8 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- ☆16Updated last year
- Statistical fine-mapping pipeline in FinnGen☆26Updated last week
- SCALLOP-INF analysis☆18Updated 2 months ago
- Integration of TWAS and Colocalization Analysis☆13Updated 3 weeks ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis☆16Updated 2 weeks ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆15Updated 3 weeks ago
- ☆11Updated last year
- Genetic correlation calculation pipeline via summary statistics for PheWeb☆13Updated 5 years ago
- A tool to plot significant regions of GWAS☆29Updated last year
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated last week
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆11Updated 5 years ago
- GENI plots to visualise results from genome-wide association studies☆21Updated last month
- ☆21Updated 3 years ago
- PredictDB Pipeline for GTEx v7 data☆18Updated 2 years ago
- Quality control steps for GWAS☆15Updated last year
- Benchmarking gene and variant prioritization algorithms for GWAS data☆15Updated 4 years ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 7 months ago