ylab-hi / ScanExitronLinks
A computational workflow for exitron splicing identification
☆12Updated 10 months ago
Alternatives and similar repositories for ScanExitron
Users that are interested in ScanExitron are comparing it to the libraries listed below
Sorting:
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆41Updated 4 years ago
- Tutorial Website☆59Updated 4 years ago
- CLIP-seq Analysis of Multi-mapped reads☆31Updated 3 years ago
- A toolset for profiling alternative splicing events in RNA-Seq data.☆81Updated 5 months ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- Estimate locus specific human LINE-1 expression.☆35Updated 2 years ago
- Links to ATAC-seq analysis tools☆68Updated 3 years ago
- HMMRATAC peak caller for ATAC-seq data☆100Updated 8 months ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆13Updated 7 years ago
- A toolkit for QC and visualization of ATAC-seq results.☆70Updated 6 months ago
- release version☆54Updated 2 years ago
- A modular, containerized pipeline for ATAC-seq data processing☆58Updated last month
- tools to find circRNAs in RNA-seq data☆43Updated 7 years ago
- GIREMI is a method that can identify RNA editing sites using one RNA-seq data set without requiring genome sequence data.☆44Updated 8 years ago
- ☆30Updated 6 years ago
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 4 years ago
- Convert Counts to Fragments per Kilobase of Transcript per Million (FPKM)☆62Updated 4 years ago
- A quickstart tool for AmpliconArchitect. Performs all preliminary steps (alignment, CNV calling, seed interval detection) required prior …☆67Updated last week
- ☆58Updated 3 years ago
- Basic workflow for ATAC-seq analysis☆81Updated last year
- Estimation of Promoter Activity from RNA-Seq data☆53Updated last week
- ☆87Updated last week
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- ☆74Updated 2 months ago
- A list of alternative splicing analysis resources☆44Updated 3 months ago
- A method for circular DNA detection based on probabilistic mapping of ultrashort reads☆64Updated last year
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated 3 weeks ago
- A Perl/R pipeline for plotting metagenes☆37Updated 3 years ago
- Scripts to import your FeatureCounts output into DEXSeq☆33Updated 6 years ago
- ☆117Updated last year