Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
☆15Jul 28, 2025Updated last year
Alternatives and similar repositories for DIFFUSE
Users that are interested in DIFFUSE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10May 12, 2020Updated 6 years ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆15Sep 17, 2026Updated last month
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 6 years ago
- AIDE: annotation-assisted isoform discovery and quantification from RNA-seq data☆16Aug 6, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code for Predictive Network Representation Learning (SIGIR 2017)☆11Apr 24, 2020Updated 6 years ago
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆114Feb 7, 2024Updated 2 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆16Sep 16, 2025Updated last year
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated 3 months ago
- OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks☆11Jul 9, 2020Updated 6 years ago
- Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.☆11Nov 14, 2024Updated last year
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 10 months ago
- rnalib: a python-based transcriptomics library☆14Jul 27, 2026Updated 3 months ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆22Aug 13, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 9 years ago
- The shiny app that accompanies the ngsReports R package☆14Jun 10, 2021Updated 5 years ago
- Sweep Inference Framework (controlling for correlation)☆29Jul 10, 2024Updated 2 years ago
- Codon-Aware Multiple Sequence Alignments☆19Oct 17, 2026Updated 2 weeks ago
- PSI-Sigma☆44Nov 10, 2023Updated 2 years ago
- Long read to rMATS☆32May 5, 2023Updated 3 years ago
- Annotation Extraction Genomic Integration Suite (AEGIS) is a powerful and flexible Python-based suite for the manipulation, analysis, and…☆15Updated this week
- CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.☆10Oct 10, 2020Updated 6 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆33Apr 19, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Paired Replicate Analysis of Allelic Differential Splicing Events☆14Feb 21, 2023Updated 3 years ago
- epiTCR: a highly sensitive predictor for TCR–peptide binding☆16Aug 15, 2025Updated last year
- End-to-End learning framework for circular RNA classification from other long non-coding RNA using multimodal deep learning☆26Jan 23, 2020Updated 6 years ago
- ☆21Sep 20, 2021Updated 5 years ago
- ☆21Oct 27, 2026Updated last week
- A suite for the analysis of CLIP-Seq datasets.☆12Jan 31, 2022Updated 4 years ago
- Generate Novel Insights from Gene Correlation Data☆14Jun 27, 2022Updated 4 years ago
- ☆10Dec 4, 2021Updated 4 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Rust wrapper for STAR aligner☆23Apr 13, 2026Updated 6 months ago
- GFF3 format with miRNA and isomiR information from sequencing data☆17Aug 5, 2019Updated 7 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆18Dec 13, 2024Updated last year
- ☆36Dec 24, 2020Updated 5 years ago
- snakemake workflow for bulk RNA-seq workflow using STAR-edgeR☆14Oct 13, 2026Updated 3 weeks ago
- The user can generate Molecular Tumor Board reports for TCGA samples☆15Mar 21, 2020Updated 6 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 3 years ago