chenhcs / DIFFUSELinks
Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
☆15Updated 4 months ago
Alternatives and similar repositories for DIFFUSE
Users that are interested in DIFFUSE are comparing it to the libraries listed below
Sorting:
- R tool to analyse and integrate multiple -omics data☆15Updated 6 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆28Updated 10 months ago
- ☆28Updated 8 months ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆22Updated 2 years ago
- Examples for gget (https://github.com/pachterlab/gget).☆39Updated 3 months ago
- python based queries for the proteomesoflife neo4j network database☆14Updated 5 years ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆29Updated 7 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆43Updated 2 months ago
- PRedictor of IMmunogenic Epitopes☆25Updated 2 months ago
- ☆18Updated last year
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆27Updated last year
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆33Updated 8 months ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Updated 4 months ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- A hierarchical deep learning framework for ncRNA-protein interaction prediction.☆14Updated 3 years ago
- ☆10Updated 4 years ago
- BPNet manuscript code.☆12Updated 5 years ago
- Scripts for building computational models of gene regulation with tensorflow☆11Updated 5 years ago
- Generate Robust Disease-Specific Response Signatures from the LINCS-L1000 Data☆15Updated 3 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Updated 3 months ago
- HLA-II ligand predictor.☆45Updated 2 years ago
- ☆33Updated 3 years ago
- Kdrew's scripts for handling protein complex map data☆14Updated 6 months ago
- Network Visualization using both GUI and Programming☆29Updated 6 months ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- Phylogenetic pathway–dependent recognition of fixed substitutions and parallel mutations☆11Updated 2 months ago
- Bayesian enrichment estimation in R☆11Updated last month
- rnalib: a python-based transcriptomics library☆11Updated last month
- ☆38Updated 2 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago