Deep learning based prediction of IsoForm FUnctions from Sequences and Expression
☆15Jul 28, 2025Updated 7 months ago
Alternatives and similar repositories for DIFFUSE
Users that are interested in DIFFUSE are comparing it to the libraries listed below
Sorting:
- pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome asse…☆14Oct 28, 2025Updated 4 months ago
- rnalib: a python-based transcriptomics library☆11Jan 23, 2026Updated last month
- RNA-binding protein motif analysis☆10Sep 29, 2025Updated 5 months ago
- 将速铂下载工具进行封装,以便高效方便地批量下载SRA测序数据。☆10Sep 1, 2020Updated 5 years ago
- OPUS-TASS: A Protein Backbone Torsion Angles and Secondary Structure Predictor Based on Ensemble Neural Networks☆10Jul 9, 2020Updated 5 years ago
- Generate Novel Insights from Gene Correlation Data☆13Jun 27, 2022Updated 3 years ago
- Expedition suite for computing, visualizing, and analyzing single-cell alternative splicing data☆11Jun 29, 2017Updated 8 years ago
- GIANT (Gene-based data Integration and ANalysis Technique) is a method for large-scale joint analyses of atlas-level single cell data.☆14Jun 13, 2023Updated 2 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Apr 19, 2020Updated 5 years ago
- ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…☆11Apr 20, 2022Updated 3 years ago
- CircSplice☆12Feb 27, 2019Updated 7 years ago
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆12Apr 14, 2022Updated 3 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Apr 12, 2023Updated 2 years ago
- The shiny app that accompanies the ngsReports R package☆13Jun 10, 2021Updated 4 years ago
- AIDE: annotation-assisted isoform discovery and quantification from RNA-seq data☆14Aug 6, 2022Updated 3 years ago
- MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences☆15Jan 14, 2022Updated 4 years ago
- Comprehensive and scalable differential splicing analyses☆18Dec 19, 2025Updated 2 months ago
- ☆17Jul 7, 2025Updated 7 months ago
- A comprehensive tool to infer TF-centred, spatial gene regulatory networks for the spatially resolved transcriptomic data.☆20Apr 27, 2025Updated 10 months ago
- detection of mutations causing splicing change☆13Oct 6, 2022Updated 3 years ago
- ☆60Feb 13, 2026Updated 3 weeks ago
- PSI-Sigma☆40Nov 10, 2023Updated 2 years ago
- ☆18Aug 22, 2021Updated 4 years ago
- ☆18May 31, 2024Updated last year
- Retrieving HGNC gene symbol reports (human genes only) via a list of gene IDs.☆22Oct 15, 2025Updated 4 months ago
- Deep-learning Augmented RNA-seq analysis of Transcript Splicing☆115Feb 7, 2024Updated 2 years ago
- Codon-Aware Multiple Sequence Alignments☆20Nov 15, 2024Updated last year
- Identifying genome-wide translated open reading frames using ribosome profiling☆24May 30, 2023Updated 2 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Sep 29, 2025Updated 5 months ago
- CDS prediction in transcripts☆24Mar 5, 2025Updated last year
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Jul 31, 2023Updated 2 years ago
- Discovery of biological sequence motifs in R☆29Dec 20, 2018Updated 7 years ago
- ☆23Jun 7, 2024Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Aug 3, 2023Updated 2 years ago
- Python CLI to convert between zero and one based genomic coordinate systems☆23Jul 27, 2018Updated 7 years ago
- Sweep Inference Framework (controlling for correlation)☆28Jul 10, 2024Updated last year
- A tool for large scale omics datasets evaluation☆23Jun 14, 2023Updated 2 years ago
- RiboNN: predicting translation efficiencies from mRNA sequences☆53Jan 12, 2026Updated last month
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago