gladkia / igvRLinks
An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
☆46Updated 11 months ago
Alternatives and similar repositories for igvR
Users that are interested in igvR are comparing it to the libraries listed below
Sorting:
- Genomic plot in trellis layout☆41Updated last year
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 2 months ago
- Explore design matrices interactively with R/Shiny☆37Updated 3 weeks ago
- A small R package to make sequencing read coverage plots in R.☆39Updated 2 weeks ago
- Representation and manipulation of genomic intervals☆46Updated last week
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- Glimma R package☆50Updated last year
- R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data☆21Updated 5 months ago
- Differential expression and allelic analysis, nonparametric statistics☆29Updated 9 months ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- A tidy interface for coverage analysis☆31Updated 5 years ago
- Bioconductor package that makes BIG data pint-sized.☆21Updated last year
- Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R☆32Updated last month
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated 3 weeks ago
- TOP results by CONfident efFECT Sizes.☆14Updated 10 months ago
- R package wrapping bedtools☆44Updated 7 months ago
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRa…☆27Updated 6 months ago
- Lollipop-diagram to interactively visualize genetic mutations☆33Updated last year
- An R for fast and flexible DNA methylation analysis☆34Updated last month
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆25Updated 2 years ago
- ☆29Updated last year
- R package to organise and standardise your genomic variant calls obtained with different callers.☆11Updated 6 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆31Updated 6 months ago
- HOT regions paper☆11Updated 6 years ago
- Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline☆20Updated 10 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- R interface to 'Gos'☆39Updated 2 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago