pybio is a comprehensive Python framework designed to streamline genomics operations. It offers a direct interface to Ensembl genome assemblies and annotations, while also accommodating custom genomes via FASTA/GTF inputs.
☆15Jul 11, 2026Updated last week
Alternatives and similar repositories for pybio
Users that are interested in pybio are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆23Jul 16, 2026Updated last week
- apa: research platform for the study of alternative polyadenylation, expressRNA.org☆12Sep 2, 2021Updated 4 years ago
- Deep learning based prediction of IsoForm FUnctions from Sequences and Expression☆15Jul 28, 2025Updated 11 months ago
- detection of mutations causing splicing change☆13Oct 6, 2022Updated 3 years ago
- The user can generate Molecular Tumor Board reports for TCGA samples☆15Mar 21, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Snakemake pipeline for running MAJIQ☆23Dec 20, 2023Updated 2 years ago
- Tool for exploring sequence alignment algorithms☆14Aug 30, 2024Updated last year
- ☆19May 31, 2024Updated 2 years ago
- cgat-apps repository☆36Apr 9, 2025Updated last year
- Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits☆11Jun 2, 2021Updated 5 years ago
- ☆24Apr 15, 2024Updated 2 years ago
- Ultra-fast 5' and 3' demultiplexer☆30Apr 23, 2024Updated 2 years ago
- Lightning fast Search Bar component for React using Trie! Get filtered results and suggested searches on the go!☆11Dec 3, 2022Updated 3 years ago
- ☆29Apr 18, 2023Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Paired Replicate Analysis of Allelic Differential Splicing Events☆12Feb 21, 2023Updated 3 years ago
- This repository hosts my personal notes and assignments for the `2024 Complete Neo4j GraphDB Bootcamp` Udemy course.☆19Mar 20, 2024Updated 2 years ago
- RNA-binding protein motif analysis☆11Sep 29, 2025Updated 9 months ago
- ☆24Jul 29, 2025Updated 11 months ago
- ☆25Jun 27, 2023Updated 3 years ago
- snakemake workflow for bulk RNA-seq workflow using STAR-edgeR☆13Jul 13, 2026Updated last week
- Detecting Aberrant Splicing Events from RNA-sequencing data☆17Dec 10, 2024Updated last year
- Reference implementations of minimizer schemes to go with the mod-minimizers paper.☆29Jul 12, 2026Updated last week
- Cache-friendly, Parallel, and Samplesort-based Constructor for Suffix Arrays and LCP Arrays☆20Jun 23, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Core functionality of the CGAT code☆34Mar 8, 2026Updated 4 months ago
- A suite for the analysis of CLIP-Seq datasets.☆12Jan 31, 2022Updated 4 years ago
- mitochondrial variant analysis tools☆15Mar 4, 2021Updated 5 years ago
- R package to detect splicing QTLs (sQTLs)☆13Jul 3, 2023Updated 3 years ago
- tspex: tissue-specificity calculator☆39Jul 4, 2023Updated 3 years ago
- Yapay Zeka destekli yazılım geliştirme dersine ait notların ve örnek uygulamaların yer aldığı kod reposudur.☆17Jun 5, 2026Updated last month
- ChIP-seq DC and QC Pipeline☆36Mar 19, 2021Updated 5 years ago
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated last week
- MONET : MOdularising NEtwork Toolbox - https://doi.org/10.1093/bioinformatics/btaa236☆50Sep 9, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- an R package for deep mining gene co-expression networks in multi-trait expression data☆22Jan 23, 2026Updated 6 months ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆14Mar 14, 2024Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆51Jun 11, 2026Updated last month
- Nextcloud / Owncloud CLI Webdav Client☆12Nov 20, 2022Updated 3 years ago
- ☆18Jan 17, 2019Updated 7 years ago
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 11 months ago
- Fast motif matching in R☆49Jan 24, 2024Updated 2 years ago