enormandeau / barque
eDNA metabarcoding pipeline
☆33Updated 2 months ago
Alternatives and similar repositories for barque:
Users that are interested in barque are comparing it to the libraries listed below
- Phylogenetic penalized likelihood☆47Updated 8 months ago
- Population assignment analysis using R☆17Updated 2 weeks ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆14Updated 2 months ago
- UCE Bioinformatics Pipeline☆16Updated 4 months ago
- A web app for environmental DNA metabarcoding analysis☆10Updated 3 years ago
- Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies☆19Updated last month
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Updated 9 months ago
- A package for population structure inference from RAD-seq data☆31Updated 3 years ago
- Workflow to detect and phase hybrids in target capture data☆18Updated 2 years ago
- Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics☆21Updated last year
- Modification of BayesAss 3.0.4 to allow handling of large SNP datasets☆16Updated 3 years ago
- Performing highly efficient genome scans for local adaptation with R package pcadapt v4☆40Updated 6 months ago
- ☆20Updated 2 years ago
- Repository for speciation genomics website☆25Updated 9 months ago
- ☆12Updated last year
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 6 months ago
- ☆31Updated 3 years ago
- ☆13Updated 7 years ago
- Helper scripts for processing and visualization of phylogenetics datasets☆28Updated last year
- This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MA…☆34Updated last year
- method for modeling continuous and discrete population genetic structure☆35Updated last year
- ☆26Updated 4 years ago
- JAMP - Just Another Metabarcoding Pipeline☆34Updated 3 years ago
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆22Updated 2 years ago
- the hierfstat package☆24Updated 5 months ago
- An R Package to build and simulate coalescent models☆20Updated last year
- microhaplotype visualizer and analyzer☆18Updated 3 years ago
- RADseq workflow using STACKS☆57Updated this week
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆25Updated 2 weeks ago
- A robust and fast clustering method for amplicon-based studies☆31Updated 2 years ago