apallavicini / PLANiTSLinks
PLANiTS: a curated sequence reference dataset for plant ITS DNA metabarcoding
☆11Updated 4 years ago
Alternatives and similar repositories for PLANiTS
Users that are interested in PLANiTS are comparing it to the libraries listed below
Sorting:
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics☆11Updated 4 years ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆38Updated last month
- Population Genomics in R workshop☆12Updated last year
- Infering ancestral synteny with hierarchical orthologous groups☆27Updated 3 weeks ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆18Updated 3 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Updated 2 years ago
- OMAmer - tree-driven and alignment-free protein assignment to sub-families☆19Updated this week
- easy_sbatch - Batch submitting Slurm jobs with script templates☆17Updated 3 years ago
- ☆20Updated last year
- ☆15Updated 7 years ago
- Nanopore Real-Time Analysis Tool☆15Updated last year
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- convert a blast output to a bed file☆12Updated 10 years ago
- Tools for merging Tandem Repeat VCF files☆33Updated 4 months ago
- ☆19Updated last year
- Improved Phased Assembler☆28Updated 3 years ago
- GATB Minia assembly pipeline☆30Updated 2 years ago
- A JBrowse plugin to view multiple alignment format (MAF) files☆26Updated last year
- A Nextflow pipeline for running synteny analysis.☆15Updated 2 months ago
- Fast in-silico normalization algorithm for NGS data☆23Updated 3 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Updated 3 years ago
- De novo VIral Genome Annotator☆23Updated 11 months ago
- Repository created to host the R package OneMap: software for constructing genetic maps in experimental crosses: full-sib, RILs, F2 and b…☆38Updated last year
- Assembler for raw de novo genome assembly of long uncorrected reads.☆37Updated 5 years ago
- PanGenomePipeline☆16Updated last year
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 3 months ago
- Utility program for extracting sequences from a fasta/fastq file☆36Updated 8 months ago
- Flexible linear mixed model framework for Genome Wide Association Studies☆18Updated last month
- Convert genbank files to a swath of other formats☆18Updated last year