enormandeau / gawnLinks
Genome Annotation Without Nightmares
☆46Updated 9 months ago
Alternatives and similar repositories for gawn
Users that are interested in gawn are comparing it to the libraries listed below
Sorting:
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆32Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆74Updated 4 years ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 11 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 2 weeks ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- Transposable element polymorphism identification☆34Updated 5 years ago
- ☆44Updated 8 years ago
- Fast and pretty dotplots for whole genomes assemblies using minimap and R/ggplot2☆76Updated 9 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 9 months ago
- A pipeline that accepts a VCF file to run through Admixture☆63Updated 9 months ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆31Updated 4 years ago
- Calculate GC% and GC deviation for circular genomes☆17Updated 2 weeks ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 9 months ago
- Synteny Imager☆64Updated 3 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- A (very) simple script to QC Hi-C data.☆26Updated 10 months ago
- ☆29Updated last year
- R Package to Estimate Variable Recombination Rates using Population Genetic Data☆42Updated 5 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- An easy way to run BioNano genomic analysis☆28Updated 4 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆54Updated 4 months ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago