Mitohelper: a mitochondrial reference sequence analysis tool for fish eDNA studies
☆21Nov 14, 2025Updated 5 months ago
Alternatives and similar repositories for mitohelper
Users that are interested in mitohelper are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆23Feb 23, 2023Updated 3 years ago
- A generalised, dynamic DNA reference library for metabarcoding of fishes☆18Mar 17, 2026Updated last month
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆24Jul 15, 2025Updated 9 months ago
- An open-source data management system for tracking environmental DNA samples and metadata☆15Aug 8, 2024Updated last year
- eDNA metabarcoding pipeline☆46Mar 11, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆13Feb 22, 2024Updated 2 years ago
- Shark genomics & beyond - This is a central portal page for the project Squalomix, directed mainly by Molecular Life History Laboratory a…☆11Aug 15, 2025Updated 8 months ago
- A web app for environmental DNA metabarcoding analysis☆11Dec 30, 2021Updated 4 years ago
- Metabarcoding analyses pipeline - metaBarcoding and Environmental DNA Analysis Tool☆20Apr 17, 2019Updated 7 years ago
- Python-based pipeline for analyzing Nanopore sequencing metabarcoding data☆18Jun 28, 2021Updated 4 years ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Sep 5, 2025Updated 8 months ago
- Scripts for analyzing Illumina-generated environmental DNA sequence data.☆21Feb 22, 2018Updated 8 years ago
- This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers☆22Jul 23, 2025Updated 9 months ago
- LoD calculator☆25Jul 11, 2019Updated 6 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Site frequency spectrum estimation based on window expectation-maximisation algorithm☆17May 19, 2023Updated 2 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Dec 1, 2022Updated 3 years ago
- Communities Assembly by Traits: Individuals and beyond☆13Apr 1, 2026Updated last month
- Information on the SCAR/rOpenSci collaboration to support open and reproducible Antarctic and Southern Ocean science☆12Sep 13, 2023Updated 2 years ago
- Model and predicts species accounting for their known trophic interaction network☆18Jun 24, 2024Updated last year
- shotgun pipeline☆12Apr 3, 2019Updated 7 years ago
- JAMP - Just Another Metabarcoding Pipeline☆39Jan 7, 2022Updated 4 years ago
- Framework for analyzing low depth NGS data in heterogeneous populations using PCA.☆61Jun 27, 2025Updated 10 months ago
- R package for downstream analysis for anacapa eDNA pipeline☆23Dec 10, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Retrieve sequences flanked by an arbitrary number of primers from a nucleotide collection.☆11Jun 11, 2021Updated 4 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆18Jul 31, 2025Updated 9 months ago
- cross-species analysis of cell identities, markers and regulations☆12Jul 11, 2025Updated 9 months ago
- creating reference databases for amplicon sequencing☆50Jan 13, 2026Updated 3 months ago
- ☆15Apr 1, 2024Updated 2 years ago
- A toolkit for annotation of transposable element families from unassembled sequence reads☆31Dec 19, 2025Updated 4 months ago
- Physalia course Machine Learning for Multi-Omics Integration☆21Jun 11, 2025Updated 10 months ago
- ☆16Jun 21, 2018Updated 7 years ago
- Importing and Analysing DArT type snp and silicodart data☆36Mar 27, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Spatio-temporal trends in habitat suitability from ecological niche models☆14Feb 4, 2026Updated 3 months ago
- Analysis of co-expression networks from RNA-seq data☆11Apr 6, 2017Updated 9 years ago
- Reproducible Reporting with R (R3) training materials for marine ecosystem indicators☆13Sep 7, 2021Updated 4 years ago
- Make a non-redundant, comprehensive COI database from NCBI and BOLD and include customizing options☆18May 26, 2025Updated 11 months ago
- A statistical framework for reference-free inference of archaic local ancestry☆16Nov 8, 2019Updated 6 years ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated last month
- package for interacting with fisheries databases at openfisheries.org☆26May 13, 2020Updated 5 years ago