grunwaldlab / Population_Genetics_in_R
A primer for computational tools to analyze genetics of populations in R
☆86Updated 4 years ago
Alternatives and similar repositories for Population_Genetics_in_R:
Users that are interested in Population_Genetics_in_R are comparing it to the libraries listed below
- An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.☆146Updated last year
- Shiny apps for teaching Population Genetics☆62Updated 2 years ago
- functions to analyse sanger sequencing reads in R☆100Updated 10 months ago
- Estimating Effective Migration Surfaces☆102Updated last year
- Population and Evolutionary Genetics Analysis System☆29Updated 7 months ago
- Sydney Phylogenetics Workshop☆63Updated last month
- Pdfs of slides from 2018 popgen course☆36Updated 6 years ago
- a bash pipeline for RAD sequencing☆52Updated 2 weeks ago
- Tutorials for bioinformatics and data analysis related to landscape genomics☆26Updated 6 years ago
- Automatically exported from code.google.com/p/jmodeltest2☆77Updated 3 years ago
- ☆169Updated 4 years ago
- Programs to analyse NGS data for population genetics purposes☆172Updated 5 months ago
- Scripts to calculate population genetics statistics☆55Updated 6 years ago
- adegenet: a R package for the multivariate analysis of genetic markers☆179Updated last week
- r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)☆63Updated last year
- RADseq Data Exploration, Manipulation and Visualization using R☆59Updated 3 months ago
- ☆29Updated 3 years ago
- Parse NCBI taxonomy and accessions to find taxonomic assignments☆70Updated last month
- Phylogenetic Investigation of Communities by Reconstruction of Unobserved STates (PICRUST): Official repository for software and unit tes…☆90Updated 2 years ago
- EasyCodeML: A visual tool for analysis of selection using CodeML☆79Updated last year
- The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…☆70Updated 2 years ago
- A robust and fast clustering method for amplicon-based studies☆31Updated last year
- Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022☆57Updated 3 months ago
- Visualize microbiome data with black magic ggtree☆68Updated 4 years ago
- Genome wide orthology inference and dNdS estimation☆88Updated last year
- JAMP - Just Another Metabarcoding Pipeline☆32Updated 3 years ago
- ☆21Updated 5 years ago
- A set of functions to visualise genotypes based on a VCF☆85Updated 3 years ago
- Repository for speciation genomics website☆24Updated 6 months ago
- A library for running k-mers based GWAS☆106Updated 3 months ago