Alternatives and similar repositories for Population_Genetics_in_R

Users that are interested in Population_Genetics_in_R are comparing it to the libraries listed below

• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆65Updated 2 years ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆103Updated last year
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆149Updated last year
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆55Updated 3 months ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆28Updated 2 months ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 6 years ago
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆28Updated 6 years ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆101Updated 2 months ago
• simon-ho / SydneyPhyloWorkshop
  Sydney Phylogenetics Workshop
  ☆62Updated 4 months ago
• Capblancq / RDA-landscape-genomics
  ☆31Updated 3 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated last month
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆70Updated last year
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆59Updated 6 months ago
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆25Updated 9 months ago
• ddarriba / jmodeltest2
  Automatically exported from code.google.com/p/jmodeltest2
  ☆79Updated 3 years ago
• tatumdmortimer / popgen-stats
  Scripts to calculate population genetics statistics
  ☆55Updated 6 years ago
• bodkan / slendr
  Population genetic simulations in R 🌍
  ☆58Updated this week
• VascoElbrecht / JAMP
  JAMP - Just Another Metabarcoding Pipeline
  ☆35Updated 3 years ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆186Updated 3 months ago
• tobiasgf / lulu
  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
  ☆65Updated last year
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• enormandeau / stacks_workflow
  RADseq workflow using STACKS
  ☆57Updated last week
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆11Updated 4 months ago
• AntonelliLab / seqcap_processor
  Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics
  ☆21Updated last year
• frederic-mahe / swarm
  A robust and fast clustering method for amplicon-based studies
  ☆31Updated 2 years ago
• TickingClock1992 / RIdeogram
  ☆172Updated 4 years ago
• petrelharp / local_pca
  Methods for examining PCA locally along the genome.
  ☆79Updated 9 months ago
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆90Updated last year
• bcm-uga / pcadapt
  Performing highly efficient genome scans for local adaptation with R package pcadapt v4
  ☆40Updated 7 months ago
• EricArcher / strataG
  strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
  ☆25Updated 2 weeks ago