Alternatives and similar repositories for Population_Genetics_in_R:

Users that are interested in Population_Genetics_in_R are comparing it to the libraries listed below

• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆62Updated 2 years ago
• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆147Updated last year
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 2 weeks ago
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆103Updated last year
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆27Updated 6 years ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 6 years ago
• simon-ho / SydneyPhyloWorkshop
  Sydney Phylogenetics Workshop
  ☆63Updated 2 months ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆100Updated 2 weeks ago
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆55Updated last month
• Capblancq / RDA-landscape-genomics
  ☆30Updated 3 years ago
• tatumdmortimer / popgen-stats
  Scripts to calculate population genetics statistics
  ☆55Updated 6 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 4 months ago
• TickingClock1992 / RIdeogram
  ☆170Updated 4 years ago
• mfumagalli / ngsTools
  Programs to analyse NGS data for population genetics purposes
  ☆172Updated 6 months ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆183Updated last month
• ddarriba / jmodeltest2
  Automatically exported from code.google.com/p/jmodeltest2
  ☆77Updated 3 years ago
• tobiasgf / lulu
  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
  ☆64Updated last year
• speciationgenomics / speciationgenomics.github.io
  Repository for speciation genomics website
  ☆24Updated 8 months ago
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆90Updated last year
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated 4 months ago
• JimWhiting91 / genotype_plot
  A set of functions to visualise genotypes based on a VCF
  ☆85Updated 3 years ago
• thierrygosselin / stackr
  stackr: an R package to run stacks software pipeline
  ☆29Updated 4 years ago
• zoecastillo / microbiomeExplorer
  The Microbiome Explorer provides methods to analyze and visualize microbial community sequencing data either from the R command line or t…
  ☆70Updated 2 years ago
• sherrillmix / taxonomizr
  Parse NCBI taxonomy and accessions to find taxonomic assignments
  ☆73Updated last week
• lch14forever / microbiomeViz
  Visualize microbiome data with black magic ggtree
  ☆67Updated 4 years ago
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆35Updated last year
• mahendra-mariadassou / phyloseq-extended
  Various customs functions written to enhance the base functions of phyloseq. Most of them are used in the formation "Métagénomique 16S" p…
  ☆33Updated 2 weeks ago
• nt246 / physalia-lcwgs
  Files for the the Physalia course on Population genomic inference from low-coverage whole-genome sequencing data, Oct 10-13, 2022
  ☆57Updated 4 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆69Updated 10 months ago
• uit-metabarcoding / MJOLNIR
  MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R
  ☆18Updated 8 months ago