Alternatives and similar repositories for Population_Genetics_in_R

Users that are interested in Population_Genetics_in_R are comparing it to the libraries listed below

• royfrancis / pophelper
  An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
  ☆151Updated last month
• silastittes / shiny_popgen
  Shiny apps for teaching Population Genetics
  ☆67Updated 3 years ago
• roblanf / sangeranalyseR
  functions to analyse sanger sequencing reads in R
  ☆104Updated 2 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆72Updated 5 months ago
• cooplab / Popgen_teaching_code
  ☆57Updated 3 years ago
• emmanuelparadis / pegas
  Population and Evolutionary Genetics Analysis System
  ☆29Updated 2 months ago
• thibautjombart / adegenet
  adegenet: a R package for the multivariate analysis of genetic markers
  ☆198Updated last year
• dipetkov / eems
  Estimating Effective Migration Surfaces
  ☆110Updated 2 years ago
• cooplab / Popgen_EVE102_2012
  Pdfs of slides from 2018 popgen course
  ☆36Updated 7 years ago
• thierrygosselin / radiator
  RADseq Data Exploration, Manipulation and Visualization using R
  ☆59Updated 5 months ago
• uqrmaie1 / admixtools
  ☆95Updated 8 months ago
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆96Updated 5 months ago
• jpuritz / dDocent
  a bash pipeline for RAD sequencing
  ☆55Updated last year
• bodkan / slendr
  Population genetic simulations in R
  ☆63Updated 2 weeks ago
• TickingClock1992 / RIdeogram
  ☆191Updated 5 years ago
• VascoElbrecht / JAMP
  JAMP - Just Another Metabarcoding Pipeline
  ☆39Updated 4 years ago
• mfumagalli / ngsTools
  Programs to analyse NGS data for population genetics purposes
  ☆178Updated last year
• sherrillmix / taxonomizr
  Parse NCBI taxonomy and accessions to find taxonomic assignments
  ☆78Updated 6 months ago
• gdlc / BGLR-R
  ☆113Updated 4 months ago
• VascoElbrecht / PrimerMiner
  R mased batch sequence downloader, with primer development and in silico evaluation capabilities
  ☆36Updated last year
• pgugger / LandscapeGenomics
  Tutorials for bioinformatics and data analysis related to landscape genomics
  ☆30Updated 7 years ago
• emmanuelparadis / ape
  Analysis of Phylogenetics and Evolution
  ☆73Updated last week
• gbradburd / conStruct
  method for modeling continuous and discrete population genetic structure
  ☆38Updated 2 years ago
• andrewkern / popGenMachineLearningExamples
  simple examples of using supervised machine learning for population genetics inference
  ☆39Updated 8 years ago
• simon-ho / SydneyPhyloWorkshop
  Sydney Phylogenetics Workshop
  ☆68Updated 7 months ago
• jgx65 / hierfstat
  the hierfstat package
  ☆25Updated last year
• lvclark / polyRAD
  Genotype Calling with Uncertainty from Sequencing Data in Polyploids 🍌🍓🥔🍠🥝
  ☆31Updated 11 months ago
• simjoly / CourseComparativeMethods
  Examples of application of comparative methods in R
  ☆60Updated 3 years ago
• tobiasgf / lulu
  r package for post-clustering curation of amplicon next generation sequencing data (metabarcoding)
  ☆72Updated 2 years ago
• jendelman / polyBreedR
  Using genome-wide markers for polyploid breeding
  ☆12Updated last month