Standard operating procedures for H3ABionet data processing and analyses
β11Aug 30, 2021Updated 5 years ago
Alternatives and similar repositories for H3ABionet-SOPs
Users that are interested in H3ABionet-SOPs are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python Scripts for Bioinformaticsβ15Apr 24, 2024Updated 2 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 π£β11Apr 28, 2023Updated 3 years ago
- A graduate-level elective course: Python Programming for Life Science Studentsβ10Mar 26, 2026Updated 6 months ago
- Repositoryβ10Oct 23, 2024Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly availβ¦β12Sep 6, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- command line bioinformatic scripts written in Rβ24Jun 5, 2022Updated 4 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictogβ¦β13Oct 1, 2026Updated 2 weeks ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics dataβ29Aug 2, 2022Updated 4 years ago
- β10Apr 10, 2016Updated 10 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUSβ10Jul 20, 2017Updated 9 years ago
- β10Mar 4, 2025Updated last year
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseqβ12Dec 19, 2022Updated 3 years ago
- Notes by Markdown in HZAU Bioinformatics Coursesβ15Dec 16, 2025Updated 10 months ago
- Scotch pipeline for indel calling.β10Nov 25, 2019Updated 6 years ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- PhenomeXcan: mapping the genome to the phenome through the transcriptomeβ11Jun 28, 2020Updated 6 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomesβ30Sep 7, 2026Updated last month
- Building a Chinese pan-genome of 486 individualsβ12Nov 23, 2022Updated 3 years ago
- Westlake BioBank for Chinese pilot projectβ10May 17, 2023Updated 3 years ago
- β10May 17, 2022Updated 4 years ago
- GenomeTools: Scripts and Classes for Working with Genomic Dataβ12Jun 7, 2018Updated 8 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as pβ¦β11Jun 25, 2019Updated 7 years ago
- β10Apr 30, 2019Updated 7 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methodsβ11Mar 7, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI β’ AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- β24Nov 9, 2017Updated 8 years ago
- Data Visualizations for the #30DayChartChallengeβ11Apr 15, 2024Updated 2 years ago
- β10Jan 30, 2020Updated 6 years ago
- β12Jun 12, 2023Updated 3 years ago
- Contributions to the #30daychartchallengeβ11Apr 10, 2025Updated last year
- Analysis of snRNA-seq2 data coming from 3 months old mouse liver, dissecting the influence ploidy has on gene expression.β14Dec 6, 2021Updated 4 years ago
- Direct RNA publication scriptsβ11Sep 20, 2017Updated 9 years ago
- A collection of python and bash scripts for various bioinformatics-related tasksβ13Sep 19, 2024Updated 2 years ago
- Plot allele frequencies in VCF filesβ11Apr 13, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomesβ12Aug 31, 2018Updated 8 years ago
- β10Apr 13, 2022Updated 4 years ago
- Cool Bioinformatics Scriptsβ12May 21, 2024Updated 2 years ago
- A GWAS courseβ12Nov 4, 2021Updated 4 years ago
- This is the repository which contains the code that was used to generate the results and figures of the βSingle-cell RNA-sequencing reveaβ¦β14Apr 14, 2026Updated 6 months ago
- β12May 8, 2021Updated 5 years ago
- Cookiecutter for snakemake slurm profileβ17Jul 22, 2023Updated 3 years ago