tips and tricks in genome-wide association studies - a tutorial
☆14Jul 25, 2023Updated 2 years ago
Alternatives and similar repositories for gwas-tips
Users that are interested in gwas-tips are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Pipelines for NGS, imputation, gwas, ...☆30Dec 18, 2019Updated 6 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- Scripts for next generation sequencing analyses☆15Nov 6, 2025Updated 6 months ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Jun 16, 2016Updated 9 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 4 months ago
- collection of bioinformatic scripts☆32May 3, 2024Updated 2 years ago
- A Nextflow Genome-Wide Association Study (GWAS) Pipeline☆36Jun 26, 2025Updated 10 months ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Jan 21, 2026Updated 3 months ago
- ☆12Jun 16, 2023Updated 2 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15May 22, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 3 years ago
- A suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps…☆15Feb 5, 2026Updated 3 months ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated 2 years ago
- Whole Genome Sequenceing Structural Variation Pipelines☆18Apr 4, 2019Updated 7 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year
- Read PLINK BED/BIM/FAM files into R☆45Jul 26, 2021Updated 4 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Jan 11, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repository☆10Oct 23, 2024Updated last year
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail …☆12Sep 6, 2021Updated 4 years ago
- A comprehensive pipeline for post-GWAS analysis leveraging diverse types of omics data☆29Aug 2, 2022Updated 3 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated 2 months ago
- Imputation-beagle-tutorial☆38Jun 2, 2022Updated 3 years ago
- A Scientometric Review of Genome Wide Association Studies☆40Jun 30, 2023Updated 2 years ago
- This is the official development repository for BaseVar, which call variants for large-scale ultra low-pass (<1.0x) WGS data, especially …☆28Jul 28, 2025Updated 9 months ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Here, we de novo assembled 110 representative Setaria accessions from a worldwide collected 1,844 variteies, and performed pan-/graph- ge…☆29Sep 13, 2023Updated 2 years ago
- Nextflow implementation of the smoove workflow and other tools for SV calling and QC☆12Nov 12, 2020Updated 5 years ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆44Jul 27, 2023Updated 2 years ago
- ☆25Dec 1, 2016Updated 9 years ago
- 生物信息学入门的系列课程,包括Linux, shell, Python 编程,建库测序,基因组学,以及系统进化,常用软件使用等内容。☆24Sep 16, 2021Updated 4 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- Notes by Markdown in HZAU Bioinformatics Courses☆13Dec 16, 2025Updated 4 months ago