esohkevin / gwas-tipsLinks
tips and tricks in genome-wide association studies - a tutorial
☆14Updated last year
Alternatives and similar repositories for gwas-tips
Users that are interested in gwas-tips are comparing it to the libraries listed below
Sorting:
- Structural variant merging tool☆52Updated 10 months ago
- The cattle Genotype-Tissue Expression atlas v1☆26Updated 2 years ago
- Working on cotton resequencing☆11Updated 5 years ago
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆11Updated last month
- ☆17Updated last year
- A repository containing various scripts useful for performing quality control on data from genome-wide association studies and visualizin…☆20Updated 7 years ago
- Perform GWAS with gemma in a simple pipeline☆26Updated 2 months ago
- analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)☆12Updated 9 years ago
- ☆32Updated last year
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆21Updated last year
- ☆22Updated 6 years ago
- Build haplotye and generate figures☆18Updated 3 years ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆34Updated last year
- a bucket of bioinformatics scripts☆13Updated last week
- Mixed Model Package For Genome-wide association mapping.☆17Updated 6 years ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆37Updated 3 months ago
- Killifish genomics scripts☆12Updated 4 years ago
- R-package: Calculation of haplotype blocks and libraries☆30Updated 4 months ago
- Pipelines and scripts for analysing RNA-seq,genome and other sequecing data.☆9Updated 5 years ago
- GWAS QC, PCA, haplotype phasing, genotype imputation☆18Updated last month
- ☆12Updated 4 years ago
- Experimental EIGENSOFT performance improvements.☆22Updated 10 years ago
- Reliable Association INference By Optimizing Weights with R (R package for SNP-set GWAS and multi-kernel mixed model)☆23Updated 2 weeks ago
- Analysis of co-expression networks from RNA-seq data☆11Updated 8 years ago
- various bioinformatic instruments☆8Updated 4 months ago
- A haplotype analysis toolkit for natural variation study.☆30Updated last year
- Scripts to convert between file formats for various analyses☆16Updated last month
- This is the Haplotypo repository☆20Updated last year
- scripts used for processing and analyzing data in the article.☆13Updated 5 years ago
- Set of scripts to manupulate tab-delimited genotype calls files as well as to convert calls-files to other popular formats.☆10Updated 4 years ago