Alternatives and similar repositories for admixture_in_africa

Users that are interested in admixture_in_africa are comparing it to the libraries listed below

• johanzi / gwas_gemma
  Perform GWAS with gemma in a simple pipeline
  ☆27Updated 7 months ago
• MerrimanLab / selectionTools
  Pipeline to take VCF through to Selection Analysis.
  ☆58Updated 2 years ago
• whweve / IntAssoPlot
  ☆18Updated last year
• ekfchan / evachan.org-Rscripts
  Handy genetics-related R scripts
  ☆32Updated 6 years ago
• sguizard / DensityMap
  DensityMap is perl tool for the visualization of features density along chromosomes
  ☆19Updated 3 years ago
• mfumagalli / Copenhagen
  Analysis of genotyping and next-generation sequencing data in medical and population genetics
  ☆23Updated 3 years ago
• PhHermann / LDJump
  R Package to Estimate Variable Recombination Rates using Population Genetic Data
  ☆43Updated 6 years ago
• danjlawson / badMIXTURE
  R package for comparing mixture solutions to similarity data, with a focus STRUCTURE like models to ChromoPainter palettes
  ☆29Updated 6 years ago
• ListerLab / TEPID
  Transposable element polymorphism identification
  ☆34Updated 5 years ago
• rwdavies / QUILT
  QUILT: Low coverage whole genome sequence imputation with large reference panels
  ☆65Updated 3 weeks ago
• gravelLab / tracts
  A set of tools for modelling ancestry patterns along the genome.
  ☆23Updated last week
• mcstitzer / maize_genomic_ecosystem
  ☆11Updated 3 years ago
• hall-lab / sv-pipeline
  Pipeline for structural variation detection in cohorts
  ☆52Updated 4 years ago
• YaoLab-Bioinfo / binQTL
  QTL mapping with binmap data
  ☆18Updated 6 years ago
• drostlab / LTRpred
  De novo annotation of young retrotransposons
  ☆48Updated 3 years ago
• petrelharp / local_pca
  Methods for examining PCA locally along the genome.
  ☆86Updated last year
• NBISweden / pipelines-nextflow
  A set of workflows written in Nextflow for Genome Annotation.
  ☆46Updated last year
• joepickrell / pophistory-tutorial
  Tutorial on using popular tools for learning about population history
  ☆52Updated 7 years ago
• mailund / admixture_graph
  Module for analysing admixture graphs
  ☆29Updated 7 years ago
• YuLab-SMU / plotting-tree-with-data-using-ggtreeExtra
  ☆26Updated 4 years ago
• slowkoni / rfmix
  RFMIX - Local Ancestry and Admixture Inference Version 2
  ☆93Updated 2 years ago
• carringtonlab / TargetFinder
  Plant small RNA target prediction tool
  ☆26Updated 8 years ago
• Menggg / BLINK
  BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions
  ☆38Updated 8 months ago
• stephenturner / adapters
  Adapters for trimming
  ☆30Updated 6 years ago
• alisi1989 / RFMIX2-Pipeline-to-plot
  Here we present a method to plot the outputs of RFMIX version 2
  ☆28Updated last year
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 8 months ago
• chrchang / eigensoft
  Experimental EIGENSOFT performance improvements.
  ☆21Updated 11 years ago
• drostlab / myTAI
  Evolutionary Transcriptomics with R
  ☆49Updated 3 weeks ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆29Updated 6 years ago
• AlexGa / Phylostratigraphy
  Pipeline for Phylostratigraphy
  ☆13Updated 3 years ago