analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)
☆12Jun 16, 2016Updated 10 years ago
Alternatives and similar repositories for admixture_in_africa
Users that are interested in admixture_in_africa are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Feb 11, 2022Updated 4 years ago
- Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.☆11Mar 27, 2020Updated 6 years ago
- tips and tricks in genome-wide association studies - a tutorial☆14Jul 25, 2023Updated 2 years ago
- Automatically exported from code.google.com/p/malder☆11Mar 17, 2015Updated 11 years ago
- Analysis scripts from the paper "Eight thousand years of natural selection in Europe".☆11Nov 19, 2015Updated 10 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- BITE: BioInformatics tools for everyone☆22Jul 25, 2024Updated last year
- Heuristic search algorithm for fitting qpGraph models☆11Aug 4, 2022Updated 3 years ago
- Module for analysing admixture graphs☆29Apr 30, 2018Updated 8 years ago
- SEEKIN: SEquence-based Estimation of KINship☆14Oct 11, 2017Updated 8 years ago
- Method for dating admixture in ancient DNA specimens☆33Jan 12, 2022Updated 4 years ago
- Tools for identifying introgressed archaic sequence.☆12Jun 20, 2017Updated 8 years ago
- PSMC-based Migration and Split Time Inference (MiSTI) from two genomes☆12Mar 20, 2026Updated 2 months ago
- ☆13May 13, 2024Updated 2 years ago
- ☆16Feb 26, 2026Updated 3 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Consensus calling (or "reference assisted assembly"), chiefly of ancient mitochondria☆19Jul 29, 2013Updated 12 years ago
- A Toolset for Chromosome X-Wide Association Studies☆13May 1, 2018Updated 8 years ago
- Pipelines for NGS, imputation, gwas, ...☆30Dec 18, 2019Updated 6 years ago
- We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more a…☆13Aug 20, 2025Updated 9 months ago
- Scripts and notes on how to analyse ancient DNA genotype data to understand population structure☆45Jul 27, 2023Updated 2 years ago
- ☆12Mar 16, 2025Updated last year
- Repository with documentation file of our Jan 22-24 workshop on Computational Population Genetics in Jena, Germany.☆15May 9, 2019Updated 7 years ago
- Demographic analysis of Brassica oleracea☆10May 19, 2026Updated 3 weeks ago
- This book summarises prepared mini-courses for various computational tools and methods in the field of human archaeogenetic data analysis…☆17Apr 14, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Aug 18, 2023Updated 2 years ago
- A suite of tools for processing genotype data. Includes calling genotypes from .idat to plink (ped), sample/case-control variant QC steps…☆15Feb 5, 2026Updated 4 months ago
- A small R notebook describing how plot common (aDNA) population genetics PCAs using R and the tidyverse.☆14May 3, 2019Updated 7 years ago
- A python script to calculate the relative coverage of X and Y chromosomes, and their associated error bars, from the depth of coverage at…☆15May 2, 2023Updated 3 years ago
- Fast analysis and visualization of latent clusters in population genetic data☆78Mar 29, 2022Updated 4 years ago
- processing illumina SNP arrays☆19Feb 3, 2017Updated 9 years ago
- Genome Analysis Workshop (Jena 2016) material☆18Mar 3, 2017Updated 9 years ago
- ☆13Apr 30, 2019Updated 7 years ago
- This is a tool for speculation of ancestral allel, calculation of sfs and drawing its bar plot. It is easy-to-use and runing fast. What y…☆11Dec 16, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Source code for a tidy revision to LSR☆15Apr 23, 2020Updated 6 years ago
- Tutorial on using popular tools for learning about population history☆56Jul 18, 2018Updated 7 years ago
- ☆17Oct 7, 2024Updated last year
- 1000 Genomes Project Metadata R Package☆21Oct 27, 2025Updated 7 months ago
- Bayesian Logistic Regression with Hyper-LASSO priors☆10Dec 14, 2025Updated 6 months ago
- ☆13Apr 24, 2026Updated last month
- A guide to manipulating genotypic data across the common formats: VCF, EIGENSTRAT and PLINK (PACKEDPED) files. Includes how to convert be…☆24Aug 9, 2023Updated 2 years ago