☆12Dec 22, 2021Updated 4 years ago
Alternatives and similar repositories for spatial-CUT-Tag
Users that are interested in spatial-CUT-Tag are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆24Mar 29, 2023Updated 3 years ago
- Learning notes for DBiT-Notes☆12Nov 28, 2024Updated last year
- A single cell transcriptome atlas of the developing zebrafish hindbrain.☆14Jan 2, 2020Updated 6 years ago
- 基于FPGA实现的流水灯项目☆10Mar 19, 2018Updated 8 years ago
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Aug 9, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Bioinformatic approach to identify functional transcription factor binding motifs☆11May 16, 2022Updated 4 years ago
- ☆15Oct 19, 2023Updated 2 years ago
- High-definition modeling of chromatin + transcriptomics data☆26Jan 27, 2026Updated 8 months ago
- Codes used in LISTA project.☆14Apr 17, 2024Updated 2 years ago
- ☆26Jul 9, 2025Updated last year
- ☆13Jul 26, 2026Updated 2 months ago
- Stitch multiple Visium slides together☆16Oct 16, 2025Updated last year
- Axolotl Regenerative Telencehpalon Interpretation via Spatiotemporal Transcriptomic Atlas☆21Jul 3, 2022Updated 4 years ago
- ☆29Dec 25, 2023Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆12Nov 20, 2023Updated 2 years ago
- Probabilistic factor models for spatially correlated data. Includes nonnegative and real-valued versions.☆20Dec 5, 2024Updated last year
- Probabilistic Alignment of Spatial Transcriptomics Experiments☆105Feb 26, 2025Updated last year
- Codes to run deltaSVM models to predict allelic TF binding☆11Apr 5, 2021Updated 5 years ago
- ☆50Apr 8, 2025Updated last year
- ☆13Sep 4, 2025Updated last year
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆32Aug 8, 2023Updated 3 years ago
- Single cell ANANSE Gene-regulatory-network analysis from Seurat objects☆11Sep 9, 2026Updated last month
- Spatially-aware quality control for spatial transcriptomics☆17Sep 8, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆32Dec 3, 2024Updated last year
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 4 years ago
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆35Aug 16, 2021Updated 5 years ago
- ☆49Jun 3, 2026Updated 4 months ago
- Code and data used to create the JASPAR UCSC Genome Browser tracks data hub☆19Dec 11, 2025Updated 10 months ago
- Romulus: Robust multi-state identification of transcription factor binding sites from DNase-seq data☆10Mar 6, 2019Updated 7 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆60Aug 13, 2026Updated 2 months ago
- 🍹This repo includes the scripts and analysis notebook for the Droplet Hi-C manuscript☆19Feb 6, 2026Updated 8 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 4 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pipeline to run scE2G☆67Updated this week
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆14Mar 11, 2024Updated 2 years ago
- BoostDiff - Inference of differential networks from gene expression data☆14Jan 11, 2024Updated 2 years ago
- ☆16Apr 4, 2023Updated 3 years ago
- Ligand-Receptor docking with AutoDock Vina☆12Mar 21, 2024Updated 2 years ago
- R function to plot high quality, elegant heatmap using 'ggplot2' graphics . Some of the important features of this package are, colorin…☆11Apr 19, 2016Updated 10 years ago