dvitale199 / GenoToolsLinks
GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comprehensive sample/variant QC, and ancestry estimation. Ideal for computational biology and genetics research.
☆26Updated 2 weeks ago
Alternatives and similar repositories for GenoTools
Users that are interested in GenoTools are comparing it to the libraries listed below
Sorting:
- Source code of FUMA GWAS web application☆57Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated 3 weeks ago
- Cross-population polygenic prediction☆82Updated 6 months ago
- Software for estimating correlation of trait effect sizes across populations☆46Updated last week
- Code for the in-dev PrediXcan Project☆27Updated 2 years ago
- ☆22Updated last year
- Quality control steps for GWAS☆22Updated last year
- Burden testing against public controls☆50Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Updated 8 months ago
- ☆26Updated 4 years ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆64Updated 2 months ago
- A collection of commonly used resources for complex trait genetics.☆29Updated 2 weeks ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 3 years ago
- ☆35Updated 4 years ago
- A GPU version of SAIGE for full GRM GWAS analysis☆18Updated last week
- FLAMES: Accurate gene prioritization in GWAS loci☆36Updated 3 months ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆23Updated 6 months ago
- ☆40Updated 7 years ago
- ☆79Updated 3 years ago
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆11Updated 2 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆53Updated last year
- ☆32Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- Genotype-based Prediction (GenoPred)☆72Updated 2 weeks ago
- Sequence kernel association test (SKAT)☆50Updated 3 months ago
- Cross-population fine-mapping☆36Updated 5 months ago
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- ☆20Updated 2 years ago
- ☆47Updated 2 weeks ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago