dvitale199 / GenoToolsLinks
GenoTools: Advanced Genotype Data Analysis A robust suite for processing genotype data, offering genotype calling (.idat to PLINK), comprehensive sample/variant QC, and ancestry estimation. Ideal for computational biology and genetics research.
☆30Updated last month
Alternatives and similar repositories for GenoTools
Users that are interested in GenoTools are comparing it to the libraries listed below
Sorting:
- Source code of FUMA GWAS web application☆60Updated 2 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆62Updated last month
- Genotype-based Prediction (GenoPred)☆76Updated last week
- Cross-population polygenic prediction☆95Updated last month
- ☆50Updated last month
- ☆87Updated 5 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆68Updated 8 months ago
- Development for SAIGE and SAIGE-GENE(+)☆84Updated last month
- Phenome Exome Association and Correlation Of Key phenotypes☆31Updated 4 years ago
- Fine-tuning polygenic risk score models using GWAS summary statistics☆54Updated 2 months ago
- HLA-TAPAS pipeline for HLA association and fine-mapping studies☆54Updated 2 years ago
- A collection of commonly used resources for complex trait genetics.☆35Updated last month
- List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS☆31Updated last week
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- PrediXcan Project☆115Updated 3 years ago
- Convert GWAS summary statistics to VCF☆48Updated 2 years ago
- Quality control steps for GWAS☆26Updated 2 years ago
- Documentation on new GWAS Summary Statistics Standard☆23Updated last month
- ☆23Updated 2 years ago
- ☆45Updated 5 months ago
- A flexible framework for nucleosome profiling of cell-free DNA☆28Updated 2 years ago
- ☆27Updated 5 years ago
- Fast, integrative fine mapping with functional data☆61Updated 6 years ago
- GREP: Genome for REPositioning drugs☆43Updated 2 years ago
- Software for estimating correlation of trait effect sizes across populations☆50Updated 6 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated 2 weeks ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week
- Extracting disease-specific genomic coordinates from GWAS catalog☆21Updated 6 years ago
- A GPU version of SAIGE for full GRM GWAS analysis☆19Updated 4 months ago
- FLAMES: Accurate gene prioritization in GWAS loci☆57Updated 2 weeks ago