GenoML / genomlLinks
Core pipeline of GenoML
☆16Updated 5 years ago
Alternatives and similar repositories for genoml
Users that are interested in genoml are comparing it to the libraries listed below
Sorting:
- pathoscore evaluates variant pathogenicity tools and scores.☆22Updated 3 years ago
- JARVIS: a comprehensive deep learning framework to prioritise non-coding variants in whole genomes☆23Updated 8 months ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 5 years ago
- Linking GWAS studies to genes through cis-regulatory datasets☆39Updated 2 years ago
- Code to reproduce analyses from the sleuth paper☆16Updated 6 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆45Updated last year
- Gene Fusion Visualiser☆51Updated 2 years ago
- Software for comparing contact maps from HiC, CaptureC and other 3D genome data.☆27Updated 7 years ago
- A Python package for gene network analysis☆32Updated 3 years ago
- Python module to read binary Plink files.☆17Updated last year
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 7 years ago
- Flexible Integration of Data with Deep LEarning☆50Updated 2 years ago
- Extension of the WGCNA program to improve the eigengene similarity of modules and increase the overall number of genes in modules.☆65Updated 4 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆34Updated 4 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Core functionality of the CGAT code☆33Updated last month
- Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python☆21Updated 2 years ago
- Python-based preprocessing software for Illumina methylation arrays☆40Updated 2 years ago
- Deep Feature Interaction Maps (DFIM)☆54Updated 6 years ago
- ☆21Updated 2 months ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 5 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆29Updated 6 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- Tissue-specific variant effect predictions on splicing☆42Updated 2 years ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆86Updated 4 months ago
- Differential Count Data Analysis Toolbox☆61Updated last year
- IPAW: a Nextflow workflow for proteogenomics☆28Updated last year
- Prepare Sailfish and Salmon output for downstream analysis☆42Updated 6 years ago